KEGG   Rhincodon typus (whale shark): 109914331
Entry
109914331         CDS       T06055                                 
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3C-like
  KO
K10435  microtubule-associated protein 1 light chain
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04137  Mitophagy - animal
rtp04140  Autophagy - animal
rtp04216  Ferroptosis
rtp04371  Apelin signaling pathway
rtp04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    109914331
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109914331
   04137 Mitophagy - animal
    109914331
  09143 Cell growth and death
   04216 Ferroptosis
    109914331
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109914331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109914331
   03029 Mitochondrial biogenesis [BR:rtp03029]
    109914331
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109914331
Membrane trafficking [BR:rtp04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    109914331
Mitochondrial biogenesis [BR:rtp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    109914331
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     109914331
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 109914331
NCBI-ProteinID: XP_048456528
LinkDB
Position
9:83814036..83818382
AA seq 132 aa
MAVVHRTYGAHRFKHRKTFTARKEESAFIRSKYPQKIPVIVERYPGEKHLKSLDRTKFLV
PQDVIVSHFITIIRNRLALTPNQAFYLVVKNKSLSNMYTTIAELDEEYKDSDGFLYISYA
SQEMFGANWPGH
NT seq 399 nt   +upstreamnt  +downstreamnt
atggctgtcgtgcaccggacttacggagctcatcgcttcaaacaccgaaagacatttact
gcaaggaaagaggagtctgcattcattcgctccaaatacccccagaaaataccggttatt
gtggaacgatatcctggcgagaagcatctgaaatcgttggatagaaccaaattcctcgtt
cctcaagatgtaatagtgagccacttcattactatcatcaggaaccggctagctctaaca
cctaatcaagcattttaccttgtggtgaagaacaagagcctctccaatatgtatacaact
attgctgaactggatgaagaatacaaggattctgatggcttcttgtacatttcctatgcg
tcacaggaaatgtttggtgcaaactggccaggacactaa

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