Rhincodon typus (whale shark): 109914377
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Entry
109914377 CDS
T06055
Symbol
rbpjb
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region b isoform X2
KO
K06053
recombining binding protein suppressor of hairless
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109914377 (rbpjb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109914377 (rbpjb)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Other transcription factors
Others
109914377 (rbpjb)
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Ortholog
Paralog
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
109914377
NCBI-ProteinID:
XP_020369555
LinkDB
All DBs
Position
1:complement(93604555..93694213)
Genome browser
AA seq
486 aa
AA seq
DB search
MAPVVTGKFGERPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKDQMERDGCNEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSDDIGVFHSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVHAPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSLMASNDSNTNSEGSYTTVSTNSAIVTS
AATVVS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagtttggggagcgacctcaacccaaacgcctcaccagg
gaagcaatgcgaaattatcttaaggagcgtggcgatcaaactgtactaattctacatgct
aaggttgcacaaaaatcttatgggaatgagaaaagatttttctgccctcctccttgtgta
tatctaatgggcagtggatggaagaaaaagaaagatcagatggagcgagatggatgcaac
gaacaagaatcacaaccatgtgcatttattgggattggaaatagtgaccaagaaatgcag
caacttaacttggaaggaaagaactattgcacagccaaaacattgtacatatcagattct
gacaagagaaagcacttcatgttatcagtaaaaatgttttatggtaatagtgacgacatc
ggcgtctttcacagtaagcggatcaaagtaatctcgaaaccttctaagaagaaacagtcc
ttgaaaaatgcagacttatgtattgcatcaggaacaaaggtggcattatttaaccgactt
cgttcacagactgtcagcacacgttatctgcacgtagaaggaggaaacttccatgccagt
tcacaacagtggggagctttttacatccatttattggatgatgaagaatcggagggagaa
gaattcacagtgcgcgatggatacattcattatggtcagacagtgaagctggtgtgttct
gttactgggatggcactccccagactgataattcgtaaagtggataaacaaacagcatta
ttagatgcagatgacccagtatcacagctccataagtgtgcattttacctgaaagataca
gaaagaatgtatctgtgcctttctcaagaaaggataatccaatttcaagcaactccatgt
ccaaaagaaccaaacaaagaaatgataaacgatggagcctcttggacaatcataagcaca
gataaggctgaatatactttctacgaggggatggggcccgtacatgcacctgtgacacct
gtacctgttgtagaaagtcttcagttaaatggaggtggggatgttgcaatgctcgagctc
acgggacagaattttacacctaatctgcgagtttggttcggtgatgtggaagctgaaacc
atgtacaggtgcgcagagagtatgctctgtgttgttccagatatttctgcattccgagag
ggttggcgatgggtccgtcaacctgttcaggtcccagtcacactggttcgaaacgatggg
attatctactctacgagccttacttttacatatacaccagagcctggaccaagaccacac
tgcagtgctgctggagccatccttagagctaattccagcttgatggcgtcaaatgactcg
aacacaaacagtgagggaagttacacaactgtcagcacaaactcagctattgtcacatca
gcagcaacagtagtctcctaa
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