Rhincodon typus (whale shark): 109914397
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Entry
109914397 CDS
T06055
Name
(RefSeq) glutamate receptor 3-like isoform X1
KO
K05199
glutamate receptor 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109914397
04082 Neuroactive ligand signaling
109914397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109914397
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Glutamate (ionotropic)
109914397
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
109914397
NCBI-ProteinID:
XP_048461108
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All DBs
Position
14:26182935..26524564
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AA seq
904 aa
AA seq
DB search
MGQPFLQSVFLLLNVLFGVASGAFPSNVQIGGLFSRSTDQENSAFRFGIYLHNTNPNISE
APFALTPHVDNLESSNSFSVTNAFCSQYSKGVYAIFGFYDKRSVNTLTSFCGALHTSFIT
PSFPTEGEVQFVIQLRPPLQGALLSLLIHYKWERFVYLYDTDRGYSILQVIMEAAVQNNW
QVTAKSVGSITDVMEYRRIFEEMDKRQERRYLIDCELNRLNAILDQAVNVGKNIRGYHYM
LATLGFSDLVLDKFIETGVNVTGFQLVNYDNPMVQKFMQRWTKLDQREYPGTAASTLKFT
AALTYDGIFVIAEAFRYLRRQRIDISRRVTTGDCLANPAVPWSQGIDIERALKQVRGRGL
TGNLQFDNYGRRSNYTIDVYELRPSGPRKIGYWNEYERLVTIADMQQMNESTSAENRTIV
VTTIMESPYVMLKKNHEQFDANDRYEGYCVDLAFEIAKHVGIKYKLSVVPDGKYGARDPE
TKIWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS
FLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHMEENEEGRDPQNTEPPNEFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTTADGVAKVRKS
KGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGASLRNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCY
KSRAEAKTLKLTYTDATQNKGTLSIFGSIGENGRAMTPDYLQSPHAVPGVRHGTRVADGA
PDFS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaccttttctgcagtctgtcttcctgttactcaacgtgctttttggtgtagct
tcgggcgctttccccagcaatgtccaaataggcggactgttctcaagaagtacagatcag
gaaaatagcgcctttcggttcgggatttaccttcacaacacaaaccctaacatctccgaa
gcgcctttcgctctcactccacatgtcgacaacctcgagtcttccaacagtttctcagtg
accaatgctttttgttcacagtattccaaaggcgtttatgccatttttgggttctatgat
aagagatctgtgaacacgctaacgtctttctgtggagcattacacacatccttcatcact
ccaagcttccccacggaaggagaagttcagtttgtaattcaactgaggccaccactgcaa
ggagcactattaagccttcttatccactacaaatgggagagatttgtctacctgtatgac
acagacagaggatattccatccttcaggtaatcatggaagctgccgttcagaataactgg
caagttacagcaaaatcagttggaagcatcactgatgtgatggaatatagaagaatcttt
gaggaaatggacaaaagacaagaaagaagatatttaatagactgtgaactaaacagacta
aatgctattctggatcaggcggtaaatgttggtaaaaacatccgaggctaccactacatg
ttggctactctgggcttctctgatctcgtacttgataaatttattgagacaggagtcaat
gtcactggcttccagcttgtgaattatgacaatccaatggtgcaaaaatttatgcagagg
tggacaaagctagatcagagagagtatcctggaactgctgccagcacgttaaagtttacc
gctgctttgacctatgatggaatattcgtcatagctgaagcttttcgttatctacgaagg
caacggattgatatctcaagaagagtaactactggagactgtttagccaatcctgcagta
ccttggagccaaggaattgatatagaacgggctttaaaacaggtacgaggcagagggctg
acaggaaatctacaatttgacaactacggacgtagatcaaactataccatcgatgtttat
gaactaagaccttctggacctcgcaagattgggtattggaacgaatatgaaagactggtg
accatcgctgatatgcaacagatgaatgaatcgacttcagccgaaaacagaacaatagta
gtcacaactataatggaatcaccgtatgtaatgctgaagaaaaatcatgaacaatttgat
gcaaatgatagatatgaaggctattgtgtggatttagcttttgaaatagccaagcatgtt
ggcattaaatataaactgtctgttgtccctgacggtaaatatggagctagagatcctgaa
actaaaatctggaatggaatggtgggtgaactagtatatgggagagctgacattgctgtt
gcaccactcactataactttggtccgagaagaagttattgacttttccaaacctttcatg
agtcttggtatttcaataatgataaagaagccccaaaagtccaagccaggagtgttctct
ttcttggatcctttggcctatgagatttggatgtgcatagtcttcgcctacattggagtc
agcgtagtgcttttcctggtcagcagattcagtccttatgaatggcatatggaagaaaat
gaagaaggacgtgacccccaaaatactgagccacctaatgagtttgggatatttaatagt
ctctggttttctctgggtgcctttatgcagcaaggatgcgatatttcaccaagatccctc
tctgggcgaattgttggaggcgtctggtggttcttcactttgattataatctcgtcgtac
actgccaaccttgctgcttttctcactgtggagagaatggtttctccaatagaaagtgca
gaggatcttgcgaaacaaacagaaattgcctatggaacattggattcaggttctaccaaa
gaattttttcgacgctcaaaaatagcagtatatgaaaaaatgtggtcctacatgaaatct
gccgaaccatctgtgtttaccaaaacaacagctgatggagttgccaaagttcgaaaatca
aaaggaaagtttgccttcttgctagaatcaacaatgaatgaatacattgagcagaggaag
ccatgtgacaccatgaaagtaggagggaacctggattcgaaaggatatggagtggcaacg
cctaaaggagcatcattaagaaatgctgttaacctcgcagtattaaaactgaatgaacaa
ggcctcttggacaaattgaaaaacaaatggtggtacgacaaaggagagtgcggcagcggg
ggaggtgactccaaggacaagacaagtgccctgagcctgagcaatgtggctggagtcttc
tacattctggttggaggacttggtttggcaatgatggtggctttaatagaattctgttac
aagtccagagcagaggcgaagacactgaagctcacttacactgatgccacgcaaaataaa
ggaacactgtccatatttgggagcattggagaaaacggccgtgccatgacccctgactac
ctgcagtcaccgcacgctgtaccaggtgtcagacatggtaccagagtggctgatggtgca
ccagacttttcataa
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