Rhincodon typus (whale shark): 109914400 Help Entry 109914400         CDS       T06055                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1   KO K24155   rabconnectin-3a Organism rtp  Rhincodon typus (whale shark) Pathway rtp04142   Lysosome Brite KEGG Orthology (KO) [BR:rtp00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     109914400 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rtp04131]     109914400 (dmxl1) Membrane trafficking [BR:rtp04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     109914400 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     109914400 (dmxl1)    RAVE complex     109914400 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_VPS8 VPS11_N WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Motif Other DBs NCBI-GeneID:  109914400 NCBI-ProteinID:  XP_048449566 LinkDB All DBs Position 3:complement(69134388..69327078) Genome browser AA seq 2943 aa AA seqDB search MNLHQVLTGAVNPGDSCFSVGNVGDEPFTAYASGCDVVILASDFERLQIIPGAKHGNIQV GCVDCSMHQGKIAASYGNVICIFEPIALLNQKTKPSMQLNYQWQKSGQFALESVVHNLAW DPQGIRLLTGSNSLQLWSNGNLEANINEEETADETDPSKVGDWTCVWESNYKNVHTRLFL INNKKITFYIPLLPSITSLSLSENEETNGPFVVHWLNNKELHFTLSMEVFLQQLRRNLEQ QSPESVADDGQMAGKSDDEIDENSEYRKGFMQSVLSDRSNGEKTSSAVMIDHKIEVLLAE WNKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFASRIPVAFPTGDANSLSKS IVMYACTKNVDLAIQQGKLKPPGMTHSTSGMLISAGQNKSSGSLKLSIFTPNVLMISKHA DGSLNQWAVSFAEESAFSTVLGVSHKSRYCGHRFHLNDLACHSVLPLLLTTSYHNAIRTP DDGNLHNESRNFHSLQCHSSVSRNKRDIGTAAAFQDSNAIYSELILWRVDPVGPLSYSGG VSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGHYLRLYQAVIDAKK ILSELSNPEIARFVGEVFNIVSQQSTARPGCIIELDAITELYGKETQLLHVFKEDFILVN QSKKMQQKGRQTSTENSPQQEAEEPHDDFSEKFFLVVIEHKQNNRSVLHMWHLHLKSDPI SVDNATETALSPLEEQNGFASEKLHSPFFKKYQACKANLQSASRLALNSKRVYSQELALP EGVEIIRATPSAGHLSSSSVHPACLAPYLLATSCSDGKVRFWRCQVSAHSASSAAGDSLE SKFSYCWEEWPLLIEGGVVNSSSVSVPGRPVDVSCSYTSRLAVAYKQSKPVNEHSSKHFT MHVGIFECESTGGSQWILEQTIHLDDLSHTGAILDPRISIDSNLVIYNKQESHLTDHQMT FEAKPLVHLDWVSKEDGSHVLTIGIGSKLLMYGQVSGMIQNQAKKEAPAVLSLSLWDNAK EVSQSRWVLLRSVDLVSSVDGSLSLPVSLSWVRDGILVVGMDCEMHVYSQWQPHDKLDPV ITEAESGSTPSVVSLAKYGTANGSNPFLYRKNLTRSMTGLAQKFGGKKIPFQWNIEMEDS GLFEASHDLSPPLPQYHPLQLLELMDLGKIRRSKAILSHLVKCIAGEVITINDAETSHER RLRSLTISASGSTARDPLTSNKSENPDYTEIDSIPPLPLCALLAADEDISHTTFEKPSKR PNISKKNCRQSTGSNYDELFATSNLGTDLLDSFSVDDDNKLKIIDLSQYSLTYFGPEHAR VLSSHLLHSSLPGLTSMEQMFLMALADTVATISTDIGESRERTQGGETLDECGLRFLLAM RLHTFLLTSLPPVYRAQLLRQGLSTCHFAWAFHSEAEEELLNMIPAIQRGDPHWSELRAM GVGWWVRSTNILRRCIEKVAKAAFQRNNDPLEAAIFYLAMKKKAVLWGLFRSLQDKKMME FFGKNFSDDRWRKAALKNAFALLGKQRFEQSAAFFLLGGSLKDAVEVCLERLHDVQLALV IARLYESEFEVSSTYKSILVRRILGYDTKSKDFNLSLRNSDPVLRSMAYWILEDYTNSLN TLLEQGMKENDNSSVTEHSKSTSCNPGVFNFYNYLRTHPLLLRRHFASSEKTMSQMGLTV ESGLADKISLAERRLFFSTANAHFKAGCPMLALEVLSKMPAVTVKPKNLQNEASSYLTVN FSSEESEHRVLHCDCSSSIVNGLGSKVPSDWLSNGQSTSSLSFDWSQSSLTFEDQPLELK WDSDKEDEEEEIGLSMKEINPPCSTAAKIEGESYCNFSSSADDFLSPSEDVIAAQLKFGA CLKILTTELRTLSTGYEVDGGKLRFQLYKWLEREITALQKTCNYNVDLEAIKDGFEVADS EQAENGIVDQEKSLHQQEYLQRRRLWLLQNQPLLRMFLSYCSLHGSHGGGLASVRMELIL LLQESQQEHLVKQVTSPFMQLASVPLLFACTASAKTVVANPRLHLSNLTQDIVHTIVEFD SPPHPDMRNNKIYVMHTVAASLSACLYQCLCDGHSYSSSYANQFTGMVYQSFLFAQQRSN RAASLDGTVTPNTSPDQWPGIKELIHLLNSAGDEDKPKLTVLLCEVLTAVYLSLFAHGLG THSSNELFRLVAHPLNSKMWAAVFGGGAQQPLKNQVQPKPVTGRWLPEHSQQQIVMYSVD CVGFSKALAIINSARSGSAAEVETIEELPDLELKLETPHFHISEAEIVEVTAEVEGGTPD EHHNRFKGTGSKATNREAPSHNFSLPVVSQDIPVCKEKFIPPELSIWDYFIAKPFLPTVQ SKFEYDSEESQDSDDEEDAFASDTQLQEHSNPNSFSWSLMRYAMVQLVLHNLKKFYPMAG LDLSELPVCSPSCHAILKTLQRWEQVLLRRLELFGGPPQDFISMYATEGTVSSGPALLIH KALLEPTNTPFKSKHHTALPVKRLWQYLVKQEEVQEIFIRNIFTKKRCQNESVDPSNETD RNSMMEEPSINKSCNKQAEADSGYSGGRARIVHKESDIITAFAINKANRNCVAIATSHDI QELDVSAILATQIYTWVEDEFELESKGSDEFLVVHARDDFGDLQCSTPYTPSVPGTPINM PWLGSMQTGRGASVMIKRNMNNARRMASHPTLPYYLTGAQDGSVRMFEWGHSHQLACFRP SGNSRITRIRFNHQGNKFGIVDGDGFLSFWQTSPIALGATPKPYLTWQCHNKTANDFVFV SSSTLIATAGQSTDNRNICLWDTLVPQTNSLVHAFTCHDSGATVLAYVSKQQLLVSGGRK GYVCIFDLRQRLLRQTFQAHDSPIKAIALDPAEEYFITGSAEGNMKVWSLSTHNLIHTFS NEHARQSLFRNIGTGVMQIETGPANHMFSCGADGTMKMRILPDRFSTGSGKLDIWQNDVR FIL NT seq 8832 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcaccaggtcttaactggtgccgttaatcccggtgacagctgcttctcggtg ggcaacgtcggcgatgaaccgtttacggcttatgcttcaggatgtgatgtcgtgatttta gccagtgattttgaaagacttcaaattattcctggggccaaacatggaaatatccaagtt ggatgtgttgattgctccatgcatcagggaaagattgcagcatcgtatggaaatgtaatc tgcatttttgagcccattgcacttttaaatcagaaaactaagccttctatgcagcttaat tatcaatggcagaagagtggacagtttgcactggagtcagtggtacataacttagcatgg gatccgcaaggaatccgtctcttgacgggttccaattctttacagctttggtccaatgga aatctggaagctaatattaatgaggaggaaactgcagatgagacagatccaagtaaagtt ggtgattggacatgcgtctgggagtctaattacaagaatgttcacaccaggcttttctta atcaataacaagaaaatcactttttacattccactgctgccttccatcacttcattgagt ttgagtgaaaatgaagaaactaatggaccttttgttgttcattggctaaacaacaaggaa ttgcattttaccttatcaatggaggtctttttacagcagttacgaaggaacttggagcag caatctccagaatctgtagcagatgatggacaaatggccggcaaatctgatgatgaaatt gatgaaaacagtgaatatcgcaaaggatttatgcaatctgtactttcagacagaagtaat ggagaaaagacctcatcggctgtcatgattgatcataaaattgaagtgctgttagcagaa tggaacaagaatgcagacatgctctttagtatccacccaatggatggatccttactggtg tggcatgttgattggcttgatgaatatcagcccgggatgtttcgacaagtgcaggtttca tttgcctcgagaattcctgtggccttccccactggagatgcaaactctctcagcaagagt attgttatgtatgcctgtacaaaaaatgtagatcttgctattcaacaagggaaactgaag ccaccaggcatgacacattccacatctggcatgttaatctctgctggccaaaataaatca tctggtagtttaaaattgagcatcttcacacctaatgtgctcatgatttcaaaacatgca gatggatccttgaatcaatgggctgtcagttttgcagaagaatctgcattttcaactgtc cttggtgtatctcacaagtcacgttactgtggtcaccgctttcatctcaatgatttagct tgtcattcagttttgccactactgctgactacatcctaccacaatgcaatacggacacca gatgatggaaatctgcataatgaaagcaggaattttcactctttacaatgccatagttca gtgtcaagaaataaaagagacattggtacagctgcagcattccaggattccaatgcaata tacagtgaactaattctttggcgagtggatccagttgggccgttgtcgtattctggaggg gtgtcggagttagccagaatcaattctctccatgtttcagccttttcaaatgtggcttgg ctgccaactttaatcccaagttactgtctaggcgcatattgcaattctcctagtgcttgc tttgtggcaagcgatggccattacttgagattatatcaagctgttattgacgctaaaaag attttaagtgagctttccaatccagaaatcgctagatttgttggagaggttttcaatatt gtaagccagcaatcaacagcaagaccaggctgcataatagaactggatgcaatcactgag ctttatggaaaagagactcagttacttcacgtctttaaggaggattttatattagttaat caatccaagaaaatgcagcaaaagggaagacagacttccactgaaaacagtcctcagcag gaagcagaagaaccacatgatgacttttcagaaaagttctttttggtggtcattgaacat aagcagaacaatcgttcagtattgcatatgtggcatttacacctgaaatcggatccaata tctgttgataatgctactgaaactgctttgtcacctctagaggaacagaatggttttgcc tctgagaagttgcattctcctttcttcaaaaaataccaggcttgtaaagcaaatttgcaa agcgccagtcgattagctctgaactcaaaaagagtttatagccaagaattagctctgcca gagggcgtggaaatcattagagctactccttctgcagggcacctgagttcttcatcagtt catccagcttgccttgctccatatcttctagcaacttcttgctcggatggaaaggtcaga ttctggcgatgtcaggtgtcagctcattcagcatcatctgcagctggggatagcttggag agtaaattttcctattgttgggaagaatggcctttactgattgaaggaggagttgtgaac agcagttctgtgagtgtaccaggaagaccagtcgatgtaagctgttcttacacaagccga cttgctgtggcttacaagcagtcgaaaccagttaatgaacattccagtaaacacttcacc atgcatgtgggtatatttgaatgtgaatcaacaggaggctcacaatggattcttgaacag acaatccacctggatgacttgagtcacacaggtgccatattggatccaagaatcagtatt gatagtaacttagtgatttacaataagcaagaatcacatttgactgatcatcaaatgact tttgaagcaaaacctttggttcacttagattgggtttccaaggaggatggatctcatgtc ttaacaataggaattggatctaaacttctaatgtatgggcaggtttctggaatgatacaa aatcaagccaagaaagaagcaccagcagttttatctttgtctttgtgggataatgccaaa gaagtatctcagtctagatgggtgcttctcagaagtgtggatttggtttcttctgtggat ggatcattgtcattgccagtttcactttcttgggtgcgtgatggtatcctcgtggtgggg atggattgtgaaatgcatgtttattcacaatggcaaccacatgacaaattggatcccgtg ataactgaagctgaaagcggtagtactccatcagtggttagtctggcaaaatatggcact gcgaatggttccaaccctttcctgtacagaaaaaacctgaccaggtcaatgactgggctt gctcagaaatttggtggtaaaaagataccatttcaatggaatattgaaatggaggactcg ggcctttttgaagcgtctcatgatttgtctccccctctgcctcagtaccatcctttgcag cttttggagttaatggacttgggtaaaatcagacggtccaaagccatcctgtctcattta gtcaaatgtatagctggagaagtaatcactataaatgatgctgaaacaagccacgaacga cgactcagatctctgacgattagtgcaagtggcagcacggcaagagatccattaacgtca aataaaagtgaaaatcctgactatacagaaatagactctatcccccctcttcctctgtgt gcacttttagctgctgatgaagatatttctcataccacttttgaaaaaccaagcaaacga cctaatatcagcaagaaaaactgcagacagtcaacaggaagcaattatgatgaattattt gcaacgtccaacctcggtacagatttactcgatagcttcagtgttgatgatgacaataaa ctgaagattattgacctttcccagtacagtcttacctactttggtcctgagcatgctcga gtcctttctagtcatttgttgcattccagtctgcctggtcttaccagtatggagcaaatg tttttaatggcattggcagatacagtggcaactatcagcactgacatcggagagagcaga gagagaacccaaggtggagagacccttgatgaatgtggattgagatttcttttagccatg cggctccatacattcctgttgacatcattacctccagtctatcgagcacaacttcttcgt caaggtttatctacttgtcattttgcctgggcctttcattcagaggcagaggaagagctg ctaaacatgatccctgcaatacaaagaggagatcctcactggtcagaacttagagctatg ggggtaggctggtgggtgcgcagcacaaacattctacgcaggtgtatagaaaaggttgct aaagctgcattccagagaaataatgatcctttagaagcagctatattttatctcgcgatg aagaaaaaggctgtattatggggcctgttcagatctctccaggataaaaaaatgatggag ttttttggaaaaaatttcagtgatgataggtggaggaaggctgcgttgaagaatgccttc gcattgttaggtaaacaacgatttgagcagtcagcagctttcttccttttgggtggttcc cttaaggatgctgttgaggtttgtctcgaaagacttcatgatgttcagttagctcttgta atagcacgcttgtatgaatcagaatttgaagtgtcatccacttacaagtctatacttgtc agaagaatcctgggatatgatacaaagagcaaagactttaacctttctctaagaaattct gatcctgtattgcggagtatggcatattggatattagaagattacaccaactctctgaac actctgttggaacaggggatgaaagaaaatgataattccagtgtgacagaacacagcaag tctacgtcatgcaaccctggggtatttaatttctacaactatttgcgaacccatccactt ttgttgcgacgacactttgcttcttcagagaagacaatgtcacagatgggtttaacagtg gaaagtggtctggcagataagatcagcttagctgaaagaaggttgttcttttcaactgca aatgcacacttcaaagccggttgcccaatgttagctcttgaagttttgtctaagatgcca gcagtcacagtgaaaccaaagaatttacagaatgaagcaagctcttatttgacagttaat ttttcgtctgaagaatctgaacatagagttttgcattgtgattgctcgtcatcaatagtc aacggtttgggatcaaaagttccatccgattggctgtcaaacggacaatccacttcatct cttagttttgattggagtcagtcatctctaacttttgaggaccagccattggaattaaaa tgggatagtgataaggaagatgaagaggaggagattggcctgtcaatgaaggaaataaat ccaccgtgctccactgctgcaaagattgaaggagaaagttactgtaatttctcgagttca gctgatgattttttaagtccatcggaagatgtcattgcagcgcagttaaaatttggagct tgtttgaagatacttactacagagctgcgtacattgtctactggatatgaggttgatggt ggaaaactccgcttccaactgtacaaatggcttgagagagaaattacagccctacagaaa acatgtaattacaatgttgatcttgaagctatcaaagatggttttgaagttgctgacagt gaacaggcagaaaatggcatagttgaccaagaaaagtcattacatcagcaagagtatttg cagcgtaggagactgtggcttctgcaaaatcaaccactcctaaggatgtttcttagttac tgtagtctccatgggtctcatggtggaggcctggcgtcagtcaggatggagttgattctt cttttacaggaatcgcagcaggagcatttggtgaaacaggtcacaagtcctttcatgcaa cttgcatcagtacccctcctgtttgcctgcaccgcaagtgccaaaactgtggtggctaac cctagactccatctgagcaaccttacccaggacattgtgcatactattgtagaatttgat tctcctccacatccagacatgcgaaataacaagatctatgtaatgcacactgtagcagct tctctgtctgcatgcctgtaccaatgcctttgtgatggccatagttacagttcttcgtat gcaaaccagttcactgggatggtataccagagttttctgtttgcgcagcaacgttcaaac agagcagcaagtttagatggcactgtaactcccaacacttccccagaccaatggccaggt ataaaggaactaattcatctcttgaattctgctggagatgaggataaacccaaattgaca gtcctactttgtgaggtattgacagcggtttaccttagtctttttgctcatggcttggga acgcactccagcaatgagctcttccgccttgtagctcatcccctcaatagcaaaatgtgg gctgcagtttttgggggaggtgcccagcaacctctgaagaaccaagtccaacctaagcct gtaacaggaaggtggttacctgagcatagtcaacagcaaatagtaatgtactccgtggat tgtgtggggttttcaaaagctcttgcaatcatcaattctgcgcgttctggaagtgcagca gaggtagaaacaatagaagagttgcctgatttagagctgaagcttgaaactcctcatttc catatatctgaggctgaaatagttgaggttactgctgaggttgaaggtggtactcctgat gagcatcacaaccgtttcaagggcacaggttcaaaagcaacaaacagagaagcaccctct cataatttttctcttccagttgtcagtcaggacattccagtctgtaaagagaagtttatc cctcctgaacttagcatctgggattactttatagcaaagcccttccttcccacagtacag agcaaatttgagtatgactcggaggaaagtcaggacagtgatgatgaggaagatgctttt gcttcagacacacagcttcaggagcattcaaatcctaactcgttcagctggtcattgatg cgatatgctatggtacagttggtgcttcataatttgaagaagttttacccaatggcaggg ctggatctttcagagctcccagtttgttccccttcttgccatgcaattttaaaaactctt cagcgctgggaacaagtgttacttcggcgtcttgaattatttggtggtcctcctcaagat ttcatctcaatgtatgccactgaaggcacagtgtcttcaggtcctgctctcctcattcat aaagcattgctggaacccaccaataccccattcaagtcaaaacaccacaccgctcttcct gttaaaagactttggcaataccttgtgaaacaggaagaagtacaagagattttcatcaga aatattttcacaaaaaaaagatgtcaaaatgagtcagtagacccctccaatgaaacagac agaaattctatgatggaggaacctagcatcaacaagagttgcaataaacaggcggaagct gattctggttattctggtggaagagcaaggatcgtgcataaagaatctgacatcattaca gcatttgcgattaataaagctaatcggaactgtgttgccatagccacaagtcatgatatc caggagctcgatgtgtctgcaatcctggctacccagatctacacttgggttgaagatgag tttgaactggaatcaaaaggatctgatgagtttctggttgttcatgcaagagatgatttt ggtgatttgcagtgcagcacaccctatactcccagtgttcctggcactccaataaatatg ccatggctgggcagcatgcagactggcagaggggcatctgtgatgatcaagaggaatatg aacaatgccagaagaatggcttcacatccaacactgccttattatctaactggtgctcaa gatggtagtgttcgaatgtttgagtggggtcactcacatcaactagcatgctttcgacct tctggcaactccaggataacgagaatacgatttaatcatcagggtaataagtttggaatt gttgatggcgatggattcctgagcttctggcaaacaagcccaattgctttaggagctaca ccaaaaccttacctgacctggcagtgccataacaaaactgcaaatgattttgtttttgtt agttcctctactttaatagcaacagccggacagtctactgacaacaggaatatctgcctc tgggatacacttgtgccacaaaccaatagtctagttcacgctttcacctgtcatgatagt ggagccactgttttggcatatgtatcaaagcagcaacttttggtatccggtggaagaaag ggttacgtttgtatatttgatctacgtcagcgactgctgcgtcaaacctttcaggctcac gattcacctataaaggcaattgctttagatccagcagaagaatacttcattacagggtcc gctgagggtaatatgaaggtttggagtttgtctactcacaacctgattcacacattctca aatgagcatgctcgacagtcactcttcagaaacataggaacgggagtcatgcaaatcgag actggtccagcaaatcacatgttctcgtgtggagctgatggaacaatgaagatgcgaatc ctgccagatcgttttagcacaggaagtgggaagttagatatctggcaaaatgatgttaga tttatactatga

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