Rhincodon typus (whale shark): 109914410
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Entry
109914410 CDS
T06055
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109914410 (rnf115a)
04121 Ubiquitin system [BR:
rtp04121
]
109914410 (rnf115a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109914410 (rnf115a)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109914410 (rnf115a)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109914410 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
VPS18_RING_C
Zn_ribbon_19
DUF8608
zf-Nse
zf-RING_16
zf-RING_6
FAR1_N
Motif
Other DBs
NCBI-GeneID:
109914410
NCBI-ProteinID:
XP_020369591
LinkDB
All DBs
Position
46:complement(10427041..10434322)
Genome browser
AA seq
315 aa
AA seq
DB search
MTSFCSFVLYMLENRFRSTVCKGLSYTCCRQGSRIRSRHTVLEYTCPRCESGFIEEVTDE
TSFLDNGTNGLDDDSATQFAELWDRTFLNLDQTFLFVDGRPLRSGTSLDHEGGEPERGSQ
QNDIWGPSRHTRLPMARRYRARGASRPERSPAIEGIIQQLFAGLFNAGISGSQQTFSWSG
MLHSNPADYAWGQSGLDAVITQLLGQLENTGPPPADKDKITALPTVHITQEQIDSGLECP
VCKEDYLLEEQVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLNGEVTMGHRQTSEELSG
NLTGSENRQRDPWAY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcttttgttcctttgtcttatacatgctggagaaccggttccggtccaccgta
tgcaaagggttgtcgtacacatgctgcaggcagggttccagaatacgctctcggcataca
gttctggaatacacctgtcctcgatgtgagtctggctttatagaggaagtcacagacgaa
acaagttttttggacaatggaacgaatggccttgatgatgattcagccacacagtttgct
gagctatgggatcgcaccttcctgaacctggaccagaccttcctgtttgttgatgggaga
cccttgcgcagcggcacctctctagatcacgaaggtggggaaccagaacggggaagccag
cagaacgatatctggggtcccagccgacacacgaggttaccgatggccagaaggtaccga
gcccgaggagcatctcgccctgagaggtccccagccattgaaggaataatccagcagctg
tttgctggcctcttcaatgcaggaatctcgggctctcagcagacgttctcctggagcggg
atgctgcactcaaaccctgccgattatgcctgggggcagagtggccttgatgcagtgatt
acacagcttctgggacaactagaaaacacaggacctcccccagcagacaaagacaaaatc
acagccctcccgacagtgcacatcacacaggagcagatcgactccggtttagaatgtccg
gtttgtaaagaggattatctccttgaggaacaggtccgacagctgccctgtaatcacttc
ttccacagcgactgcatcgtaccctggttagaactgcatgatacctgtcccgtgtgtcgc
aagagtttgaatggagaagtcaccatgggtcaccggcaaacctcagaggagttatctggt
aacttgactggcagtgaaaatcggcagcgagacccttgggcatactga
DBGET
integrated database retrieval system
