Rhincodon typus (whale shark): 109914567
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Entry
109914567 CDS
T06055
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109914567 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
rtp04050
]
109914567 (edar)
Cytokine receptors [BR:
rtp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
109914567 (edar)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
SCIMP
PFF1_TM
Chordopox_G3
MLANA
DUF2852
PspB
DUF3671
Motif
Other DBs
NCBI-GeneID:
109914567
NCBI-ProteinID:
XP_048454121
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All DBs
Position
6:45344864..45427463
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AA seq
454 aa
AA seq
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MLHCKTLWRAHVFPLLLVSLISSVIADYSSECGENEYFNHTTGACHACPQCHSGEEPVSN
CGYGVKDDSYGCQPCQNGKFSRGVYQICRRHKDCEGFFRATVLTPGTTETDAECGPCIPG
YYILDNRSRNTYTKVCHSCLLAPPNTKECLGITLSSSLSSSSLAVTGNSPVLQETHKVDH
AGQGHLGTALIIAMSTIFIMAVAIVLIVLFYILKTKSSTQACCSGNSVKNVEAQINTQED
KKEVQENVVIFAEKDEFDNKLKAVPPKTEKNENDASSENEQLLSRSMDSDEEAALDKRGM
SDLCLLSLVPLTRDKSANNKAIGVQTRREKILELCKKVCSFTEGLSPTELPFDCLEKTSR
MLSSTYSTDKAIVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTRLVHI
ERMDAVEALCMDVLECTQCAPIANPAILPKCANV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttgcactgcaagacactctggcgcgcacatgttttccctttactattggtatccttg
atctcttcagttattgctgactactcctcagaatgtggggaaaatgaatattttaatcac
acaactggagcttgccatgcctgtcctcaatgtcactcaggtgaagaacctgtttcaaac
tgtggatatggagttaaggatgattcctatggctgccagccttgccagaatggcaaattc
tcaaggggggtatatcaaatctgcagaagacacaaagattgcgagggtttctttcgagct
actgtcttgacaccaggcaccacagaaaccgatgcagaatgtggaccttgtatcccaggt
tactacatcctagacaatagatccagaaacacctatacaaaggtttgccattcctgttta
ctggcacctcctaacacaaaagaatgcttgggcattactttgtcttcaagcttatcaagc
agtagcttagctgtcactggaaactctccagttctacaagaaactcacaaagtagatcat
gctggacaaggtcacctgggcactgctttgataattgccatgtccaccattttcataatg
gccgtagccattgttttaattgttcttttctacattttaaagacaaagtcttctactcag
gcttgctgcagtggcaattccgtaaaaaatgttgaagctcagatcaatacccaagaagac
aagaaggaagtacaagaaaatgttgtaatattcgctgagaaagatgaatttgataacaaa
ctcaaggcagttccacctaagactgaaaagaatgaaaatgatgcttcctcagaaaatgag
cagcttttgagccggagtatggacagtgatgaggaagccgctttagacaagcggggaatg
tctgatttatgcctcttgtcgttggttcctttaacgagagataaatcagcaaacaacaaa
gcaattggggtacagacacgaagggagaagatacttgagctatgcaagaaagtgtgcagt
ttcacagaagggctcagccctacagaactgccttttgactgtcttgagaaaaccagcaga
atgttgagctctacctacagcacggataaagctattgtgaaaacatggcgtcatctggca
gagagctttgggctgaagagggatgaaataggtggaatgacagatggaatgcaactcttc
gatcgtataagcacagcaggttacagcatccctgaactgctgaccagacttgtgcatatt
gaaaggatggatgctgtagaagccttgtgtatggatgttttagagtgcacgcaatgtgca
ccaatagctaatcctgctatcttacccaaatgtgcaaatgtgtag
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