Rhincodon typus (whale shark): 109914645
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Entry
109914645 CDS
T06055
Name
(RefSeq) POU domain, class 5, transcription factor 3-like
KO
K09367
POU domain transcription factor, class 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109914645
03021 Transcription machinery [BR:
rtp03021
]
109914645
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109914645
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
109914645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109914645
NCBI-ProteinID:
XP_020369840
LinkDB
All DBs
Position
28:6090942..6111351
Genome browser
AA seq
434 aa
AA seq
DB search
MSISPGQGANGAKSIQSPERAALVPFGNGVVQDVGAQFYKPGYNGLSAQYLFPFPPLKGE
YGHSESPLGDCAAVSPSGYWYPFPGAEPVPTHGAGHNSQVAVAGGYINRPEIKTEKESRG
YPQEVRYSSPSGPGPSYPPRWSSPFWQPALAASSSNSSPGSSSSSGPLPSQSYGPFPSPP
QLYPSPSQHSDSSQPLQSNTGSTGTASEEGQSSDSEEEYPTKEKMEQFAKELKHKRITLG
FTQADVGLALGNLYGKMFSQTTICRFEALQLSFKNMCKLKPILQRWLNDAENNGSLHEIC
NVEQVLDQSRKRKRRTSIENGVKRNLETYFMKCPKPTSEEISQIAEDLCLDKEVIRVWFC
NRRQKGKRMTLPCMEENDVQIPEGSPLHMSPGALMLPEPTVTQGYSAPMVPPPMYMSPFP
QALHPAVSMGNHPS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattagccctggtcaaggtgctaatggggccaaatcaatccagtctccagagaga
gcagctctggtaccttttgggaatggggttgttcaggatgtgggtgcccagttttacaaa
cctggttacaatggcctctcggcccagtatctctttcctttcccacctctgaaaggggaa
tatggccattctgagtctcctctaggggactgtgcagcggtctccccctccggttactgg
tatcccttccctggtgctgagccagtaccaacccatggagctggtcacaatagccaagtg
gcagtagctggaggatacatcaaccggccggagattaaaaccgagaaggagagcagaggt
tacccccaggaggtgaggtacagttcgcccagtggcccgggtccttcctaccctccccga
tggagcagcccgttttggcagccggccctggccgcatccagtagcaattcgagccccggc
tcctcttcgtcctcagggccgcttcccagtcagagctatgggcccttcccttcacccccc
cagctgtatcctagcccttcccagcacagcgacagcagtcaacctctccagtccaatact
ggctccaccggcaccgccagcgaggaaggtcaatccagcgacagcgaggaggagtacccc
accaaggagaaaatggaacagtttgctaaagaactaaagcacaagagaattacgcttggc
ttcacacaagctgatgttggattagctttggggaatctctatgggaagatgttcagtcag
accactatctgcaggtttgaagctctccaattgagtttcaaaaacatgtgcaaattgaag
ccaattcttcagcggtggctgaatgacgcggagaataatggcagcctgcacgagatctgt
aacgtagagcaggttctggatcagtccaggaaacggaagaggagaaccagcattgagaac
ggcgtgaagaggaacttggagacctacttcatgaagtgtcctaagcccacaagtgaggag
atctcccagattgctgaagatctctgcttagacaaagaggtgatcagagtttggttctgc
aataggcgacagaaagggaagaggatgactctgccgtgtatggaagaaaacgatgtacag
attcctgaggggagtccactccatatgtctcctggtgctctgatgttacctgagcccaca
gtaacccaaggatacagtgcacctatggtgccacctcccatgtacatgtctcccttccct
caagctctgcaccccgctgtctccatgggcaatcaccccagttag
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