Rhincodon typus (whale shark): 109914899
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Entry
109914899 CDS
T06055
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109914899 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109914899 (nipblb)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
109914899 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
MIF4G
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
109914899
NCBI-ProteinID:
XP_048450258
LinkDB
All DBs
Position
3:complement(127664813..128101851)
Genome browser
AA seq
2615 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFGGRIAEDVNCLMGCRDES
LVSQLVHSLSQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GIMQQQIIQHQQYKLPQNSIHGSPASSTFQQSTISHSPSSRFVPPQSSSANRYMTQQNSP
APSPYAPQSPPGYIQYPQHPPSYTQHQQIQQELHGSPLVSGPTYSGSPQRPVQPCLIVQT
QPSPQQQQSTSTLASVSSPMIPSGMRNIHDSKVASQMSGSSSNHHSDNSRHGSNEDYIHM
VHRLGSELLSFSSLAGSTPLECEIASRPPLILQSPPPYTSPRDAPPDILLDSPDRMGSKK
KTKKAKLTKEEKEQADKTAMYDIVSSPSKDCTKLTLRLTRVRDQQDDMLPNMDSSTENEA
ELNNIQFPEQTAKQPGTHNDIHGSMNVSAQCVPQQEQAFLQAQQGTALQQNNAIGTVKTA
QTQPQPLQQQSQQTMTPYDEVELDALAEIERIERESAMERERCSKEVQDKDKPLKKRKQD
SFPQETAGGGGGGANRPALLVSIDLQHAGRTDGQAAPPLDSENVKKSLELVRQSTEVSLT
RQDDTLGVLKPKPENHPDISRRKSENEGQKDTSRPDVIKPRPETPKQKSEIRPETPKGKH
DNRRDVAKSTPEKRLEISKHKHEGKSEHTRMKAESRSETPKPRHEGRQSSDIPKDKRELN
QETQKQKSDEKNDSERGKLDASKVRRPDTPKLIKNESDCKPPRNETPKNNQTDCSKSVKI
EKKARSDSGDRGDRGDRSERRSPEEHRLRSESPRVKQDNRESGKIKSEMKDRTALKQSRR
SDVPAGSLSSKDRDERRSEGSKVKPETLNTLSDKEKFPSYLLGGGRSNALKNFVIPKIKR
DKDGNVCNEQKELRKSVDKNELKLKVEKMDLVEDLKKVIKPVVVLHKLPFDEVQKFIKDN
EDKNASRSSSKSKSRLPSKPSKGGIDQSVLKELPPDLLAEIESTMPLCERVKMNKRKRST
VKEKPNYAEISSDEGDNDSDFESSRKRHKKDRGMDKAWECEERDRRILNEIRRSSYSIEG
RRSSGSRYRECSPGSEEDSPPPSLIDIAKKMRKREKQKKRKAYEPKLTPEEMMDSSTFKR
FTATVENILENLEDMDFTTLGEDDELPQELLLGKQQLNELSSESAKIKAMGIMDRLPTDK
MVKVLSILEKNIQDGAKLSTLFNHVSSMGITPFFVENVSELQLCGIKLVTAVFSRYEKHR
QLILEEMFASLAKLPTSKRSLRNFRLNSSDMDGEPLFIQMVTALVLQLIQCVVHLPTTEK
DSNTVDDDGDKKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQD
LLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVSCK
MDRESIDRILKQVSGIEDEVQQLQKALLDYLDENTETDPSLMFARKFYIAQWFRDTTMET
EKAMKSQNQKDDDSSDGAQHAKEVESTGEIMQRAEKRKKFLRSVIKTAPAQFSTLRMTSA
NVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFSKVTEMCVRMIRRVNDEEGIKKLVNETFQKLWFTPTPSHDAEGM
TRKILNVTDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACVQIVDNLVEHILKYE
ESLADSDSKGMNTNCLVACLITLYLFSKIQPHLMVKHAMTLQPYLTTKCNTQSDFLVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLILKHGMTVVQHCVSCLGAVVNRVTHNFKFV
WACFNRYYGALTKLKAQHQEDSSNTALVGNKPALLRSLFTVGALCRNFDFDQEEFKGNTK
VVIKEKVLELLLYFTKHEDEEVQTKAIIGLGFVFIQHPDLMFEQDVKNLYNNILRDKEAS
IGLKIQVLKNLQTYLQEEDCRMQQADKDWKKVSKQEDLKEMGDISSGMSSSIMQLYLKQV
LEAFFHTHSPVRHFALNVIALTLNQGLVHPVQCVPYLIAIGTDPESAMRNKSDQQLVEID
KKYTGFVHMKAVAGMKMSYQLQQSIQSEIRELIRGFRQEENVTALCSHLYSMIRGNRQHR
RAFLIALLNLFDDSAKTEVNLLLYIADNLACFPFQTQEEPLFIMHHIDITLSVSGSNLLQ
SFRESLLKDTQPKERKCSSSGDSDSEDEMQRPRKSRKRINSDSSDDEDDDLEDVLARLPA
DSTPLVEFVNASQGILLLLVLKQHLKNLYGFSDSKIQKYSPSESAKVYDKAVNRKSGVHF
NPRQTLDFLRNGVGHAEITETVKRNIVKQYLDFKTLMEHLDPDEEDEDGEVSASTAARNK
AINALLGGSSPKNNAETDDEESDGEERAGGGIAGATRRSKRLSEPGDLGAQLHEAVEVMD
VIAICCPKYKDRPQIARVVEKTSSGFSVHWMAGSYSGSWTEAKRREGRKLVPWVDSIKES
DIIYKKIALTSANKLTNKVVQTLRSLYAAKEGSSC
NT seq
7848 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccacacttgctgggattgctagcctcact
gatttattgaatcagcttccacttccctccccgctgcctgctaccacaacgaaaagcttg
ctgtttggagggagaattgctgaagatgtaaattgcctcatgggttgtagggatgagagt
cttgtctcacagctagtacacagcctcagccaagtctccaccgatcatatagaactgaag
gataatcttggtagcgatgacccagagggtgatattccagtcctcctgcaagctgttttg
gctagaaaccccaatgtcttcagggagaaaagcatgcagaatcgatatggggttcagagt
ggtatcatgcaacaacagatcatccaacaccaacaatacaaactaccccagaattccata
catgggagccctgcatcctccacttttcagcagtccacaatctcgcacagtccttccagt
cgatttgtaccacctcagtcaagttcagccaacagatatatgactcagcagaacagtcct
gcgcctagtccgtatgctccccagagtcctccaggttacatccaatatccacaacaccct
ccaagctatacacaacatcaacagatacaacaagagttgcatggttcccctctggtatca
ggtcctacgtattctgggagtcctcagagacctgtgcaaccctgtttgatagtccagact
cagccttctcctcagcagcaacagtcaacctccacgctagcttctgtatcaagccctatg
attcccagtggcatgcggaatattcatgatagtaaagtggcaagtcagatgtcgggctcc
tcatctaatcaccattcagataattcaagacatggatcgaatgaggactatatacacatg
gtgcatcggcttggatcagagttactgtccttttcaagtctggcaggaagcacaccattg
gaatgtgagattgcatccaggccgcctctgatcttgcagtcgccgcctccttacacctct
cccagagatgccccacctgatattctgctcgactccccagacaggatgggaagcaagaag
aaaactaaaaaggctaagctcaccaaggaggaaaaagaacaggcagataagactgctatg
tatgacattgtcagctctccatctaaagactgtacaaaactcactttgaggctgactcgg
gttcgagatcagcaggatgacatgctcccaaacatggacagcagtacagaaaatgaggca
gaattgaacaatatacagttcccagaacagactgcaaaacagccagggactcataatgat
atccatggctcaatgaatgtttctgctcaatgtgtgcctcaacaggagcaggccttcctt
caagcgcagcagggcactgccttacaacagaacaatgcaattggaacagtgaaaacagca
cagacacagccacagccactacagcaacaatcacaacagacaatgacaccatacgatgag
gtagagttggatgctttagcagaaattgaacggatagaacgagagtctgccatggagaga
gagagatgttccaaggaggtacaggataaagacaaacccttaaagaaacggaaacaagac
tcatttcctcaagagactgctggaggaggtgggggtggtgcgaatagaccagcgcttttg
gtcagtattgatctacaacatgcaggaagaactgatggacaggcagcccctcctttagat
tcagaaaatgtgaaaaagtctttggagttagtacggcagagtactgaagtgtcattaacg
cggcaagatgatactttgggggtattaaagcctaagccagaaaatcacccagatatttcc
aggagaaaatctgaaaatgaagggcaaaaagacaccagcaggcctgatgtgatcaaacca
agaccagaaactccaaaacagaaaagtgagatccggcctgagacaccgaagggaaaacat
gacaacaggcgagatgtggctaaatcaactccagaaaagagacttgaaatatctaaacac
aagcatgagggcaaatctgaacatacaagaatgaaagctgagagtcgatcagaaacgcca
aagccacgccatgagggacgacagagttcagacattcccaaagataagcgagagctaaat
caggaaacccagaaacagaagtcagatgagaaaaatgattctgagcgaggaaaactagat
gcatcaaaagtcaggagaccagataccccaaaattaataaaaaatgagtctgattgcaaa
ccacctcgaaatgagactcctaaaaataaccagacagactgttcaaaatcagtgaaaata
gaaaaaaaagcacgttccgattcaggggatcgaggagatcgtggtgaccgaagtgagcga
cgttcaccagaagaacaccggttgcggtcagaaagcccaagggtcaaacaggataacagg
gagtctggaaaaataaagtctgaaatgaaagatcgaactgcattgaaacagagtagaaga
tcagacgttccagcaggatcattgagcagtaaggatagggatgagcgaagatcggagggg
agcaaagtgaaaccagagacactcaacacactttctgataaagaaaagttcccaagctat
ctactggggggaggaaggtccaatgcactaaaaaactttgtaattccaaaaattaaacga
gataaagatggtaatgtttgtaatgagcagaaggaattgagaaagtcagtggataaaaat
gaattaaagttgaaagtggaaaagatggatctagtggaggacctgaagaaagtaatcaaa
cctgttgtggttcttcataagttgccctttgatgaagtgcagaaatttatcaaggacaac
gaagacaaaaatgcatcaagaagttccagcaaatctaagagtcgattgccctccaagcca
agtaaaggtggtattgaccaatcggtgttgaaggagctgccccctgatctccttgctgag
atagaatctacaatgccactttgtgaacgtgtcaaaatgaacaaacggaagcgcagtaca
gtgaaggaaaagccaaactatgcagaaatcagctcagatgagggtgataatgacagtgac
tttgaatcttccaggaagaggcacaagaaggatagaggaatggataaagcctgggaatgt
gaagaacgtgaccgtcggattctaaatgaaatccgaagaagcagctattctattgaaggc
agacgtagctcaggaagcagatatcgggagtgcagccctggatcagaggaggattccccc
cctcccagtcttattgatattgccaaaaagatgagaaaaagagaaaaacaaaagaagagg
aaagcatatgagcctaaacttactcctgaagaaatgatggattcgtcaacattcaaacga
ttcacagctacagtggaaaacatcttggaaaacctggaggatatggattttactacatta
ggtgaagatgatgagttacctcaggagttgttgttaggcaaacaacagctcaacgaattg
agcagcgaatctgccaagatcaaagctatgggcatcatggaccggcttccaacagacaag
atggtgaaggtgctaagtattttggaaaagaacatacaggatggggccaagctttccact
ttgttcaaccatgtttcatccatgggaattacacctttctttgtggaaaatgttagtgaa
ttgcagctgtgcggcatcaagttggtgacggctgtgttctcaaggtatgaaaagcacaga
cagttgatattggaagagatgtttgcctcacttgcaaaactcccaacaagtaagaggagt
ctaagaaatttcaggttaaacagcagcgacatggatggagagccactctttattcagatg
gtgactgccttagttttgcagctgattcaatgtgttgtacatcttccaaccacagagaaa
gattccaacactgttgatgacgatggagacaagaaggttgatcaagatgtcttaattacc
aactcatatgaaacagcaatgagaacggcccagaactttctatcagtcttcctcaaaaag
tgtggaagtaagcaaggagaagaagactacagaccactctttgagaacttcgttcaagat
ctcctttccacagttaacaaaccagagtggccagcagcagaattgttgctaagtctcttg
ggaagattactggttcaccagttcagtaacaagtcgacagagatggctctccgagtagct
tctcttgattacctgggaaccgtggcagcacggctgaggaaagatgctgtatcctgcaaa
atggaccgggagtcaattgatcggatactcaaacaggtttcagggatagaagatgaagtt
cagcagctgcagaaagcattgctggattacctggatgagaatacagagactgacccctcg
ctaatgttcgctaggaagttttacattgcacagtggtttcgtgacactacaatggagaca
gaaaaggcaatgaagtcacagaatcagaaagatgacgattcctcagatggagcacaacat
gctaaggaggtagaatctacaggcgagatcatgcaaagagcagaaaaacgcaagaagttt
cttcgctctgtcatcaaaactgccccagctcaatttagcacgctgagaatgacctctgct
aatgtagattatgaagatgcctgtctgattgtccggtacttggcctccatgaggccgttt
gcacagagttttgatatttatttgacacagattctgcgtgtactaggagaaagtgcgatc
gctgtacgaacaaaggctatgaagtgtctatctgaggtagttgctgtggatcccagcatt
cttgcaaggttggacatgcaacgcggggtccacgggcgcctgatggataattccacaagt
gtgcgtgaagcggctgtggagttactaggtcgctttgtgctgagccgacctcaactcact
gagcagtattacgacatgttgatcgagaggatattggacactggtatcagtgtgagaaag
agagttatcaagattctacgtgacatctgcattgagcaaccaaccttctctaaagtgact
gagatgtgtgtgcgaatgattcgtagagtcaatgatgaagagggcattaagaaactggtg
aatgaaacattccagaaactctggttcactcccactccttctcacgatgctgaagggatg
acacggaaaatcctaaatgtcacagatgtggtcgctgcttgcagggacactgggtacgat
tggtttgagcagcttcttcagaatttgttgaaatctgaggaagatgcttcatacaaaccc
gtgaagaaggcctgtgtgcaaatagtggataatctggtggaacacattctgaaatatgaa
gaatcccttgcagattcagatagtaaaggcatgaataccaactgtcttgtggcttgttta
attacgttatacctgttcagcaaaatccagcctcatctcatggtgaaacatgcaatgact
cttcagccgtaccttaccacaaagtgcaatacacaaagcgacttcctcgtcatctgcaat
gtggcaaagattttggaactggttgttccattgatggagcatccaagtgagaccttcttg
gccacaatagaggaagatctcatgaaacttatccttaagcatggaatgacggttgttcaa
cactgtgtgagctgtctgggagctgtagtcaacagagtaactcacaactttaaatttgtg
tgggcctgttttaataggtattatggtgctctaacaaaactgaaggcgcaacaccaggag
gattccagcaacactgctctcgttggcaataaacctgcccttcttcgctccctttttact
gttggtgcattgtgccgtaactttgactttgatcaggaggagtttaaaggcaacactaag
gtggttatcaaagagaaggtgctggaacttttgctgtacttcacaaaacatgaagatgag
gaagttcagaccaaagcaatcatagggttgggttttgtattcatacagcatccagatctg
atgtttgaacaagacgtaaagaatttgtacaacaatattcttcgagacaaagaagcctca
attggcctgaaaatccaggtactgaagaatcttcagacatacctgcaggaggaagactgt
cggatgcaacaagctgataaagattggaagaaggtgtcaaaacaggaagatctaaaggag
atgggtgatatttcctcagggatgagcagttccatcatgcagctctacctcaaacaggtt
ctggaagcttttttccacacgcactctcctgtgcgccactttgcacttaatgttattgct
ctgacgctaaaccagggattggtccaccctgtccaatgtgtgccatatttgattgccatt
ggaacagacccagaatcagcaatgcgcaacaaatcagatcaacagctggtggaaatagat
aaaaagtacacaggatttgtacatatgaaagcagtagcagggatgaagatgtcttaccag
cttcaacagtccatccagtctgagataagagagttaatccgtgggtttaggcaggaagag
aatgtgacagctttgtgttcacatctctacagcatgataagaggaaaccgacaacatcga
cgtgcattccttatcgccttactcaacctgtttgatgacagtgcgaaaactgaggtgaac
ctgcttctttacatagcggacaacttggcctgcttccctttccagacgcaagaggagcct
ctgtttattatgcaccacattgacattacgctttcagtttctggaagtaatctgctgcag
tcgttcagggagtctctattgaaagacacacagccgaaggaaaggaaatgctcgagctct
ggggacagtgatagtgaggatgagatgcagcggcctcgcaagtctaggaaacgtatcaac
tctgattcaagtgatgatgaggatgatgatctggaagatgtgctcgctcgattgcctgca
gactcgacccctcttgtggagtttgtgaatgcttctcagggaatcctattgctgttggtc
ctgaaacaacacctgaagaacttgtatggcttctcggatagtaaaatccaaaaatattct
ccttctgaatctgcgaaagtgtatgacaaggcagtaaacaggaaatcaggagtgcacttt
aaccccaggcaaacactggatttcctgagaaatggagtaggacatgcagaaataacagaa
acagtgaagagaaatatcgtcaaacagtacttggatttcaaaacgctgatggaacacttg
gatccagatgaagaagatgaagatggtgaagtgtctgctagcactgcagcccgtaataag
gcaatcaatgcacttcttggaggaagcagcccaaaaaacaatgcagaaaccgatgatgag
gagagtgatggagaggagcgagcaggtggaggcattgcaggggcaaccagaagatctaaa
cgattgtctgagccaggggatcttggagctcagctgcatgaagctgtggaagtaatggat
gtgattgccatctgctgccctaaatataaagaccggccacagattgcgagagttgtggaa
aagaccagcagtggtttcagtgttcattggatggccggttcatatagtggctcttggaca
gaggctaaacgcagagagggccgcaaactggtgccttgggttgacagtatcaaagagtcg
gacatcatttacaagaaaattgctctgacaagtgcaaataagctgactaacaaagttgtt
cagactttacgatcgctgtatgcagcaaaggaaggatcttcctgctaa
DBGET
integrated database retrieval system