Rhincodon typus (whale shark): 109914944
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Entry
109914944 CDS
T06055
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109914944
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109914944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
109914944
NCBI-ProteinID:
XP_020370147
LinkDB
All DBs
Position
21:24434947..24491033
Genome browser
AA seq
1851 aa
AA seq
DB search
MQSFRDPGAFQSNQQTFQQVRADSSRLDSYRQQNPVAQSYEAHGITSKEYYNQQSYQGYG
SNTAGTYYSGVKQASAQQPQARALSAASSYQSGAYSRQYQNEGQTPKWGSQGSSVGGLSQ
YGQDSAFKSSAPSTAAAYQQQHMQGNTGRTPPALSTQQSHFMHQAHHKSIMGQASPYIAR
PAQFNQTFQSSPSSYPTVQDYSQPSRSYEGYGQVPASSQYERQSAATPDFPSQAGYAYKA
GMAKSGGYEQNKAAQVKQHSLQYHNQAKLHLLNQSPQVYYQPDAPVKSPEQFYQTFSPTS
SHSPVSTVVRSPSYSSTPSPLMATPESLQYGQATEADIKSNVSHLMAPAVTCTTQSSSKT
PGPSCKEKLPEKLLSDGAFSSLIALSSQVENIPRTVQQLLLSNTLAPHRKMGKRLPKKSE
ILKELKSSEESLYSEEALGTPQSVQAELQEGEYSSSSEEQLDKMPFFQGHCRNSANLDAL
RKNLDTILSCSVASSNDMATDSKLDNSAQSSEACLASADFEKLAADRQALLFTKEDMKSS
SVIILKDSSKERLETELKFNHFGGDKESKGTHFNLYSAENFAGHLIRAKRPGQGQALVSD
CNKSTVKSDCSMLTEGFGDVSYSESQAFPHTIECPNTIQPLAGDYRESLVSNSNHECYSS
QIPGAPQDLEKMKSLDLPDPKGKETPLGWEELDANLSQCDLQKKYLQKLQANYKQEPRTL
QKDSAPVHLVQEREDQREGNEEEKPENGGSSNSELRLPTIEQIESTRMKVEEDEELAVES
KGSAVLQDIRKSVICDVSPTRQSVKELVPAHSEGECSCSEDKLNSTEREQDRAASSPTPR
LLPHSVIHVGPAIGAEPKVGQGDLSGAEMKPDGESGKRKDTEEGMVPEPQAVPQPLGFPT
LPSEVISSALTEIENAPTKVPESKGLRVRRMSSRPGQGAAFRGKDHSPPEPAENIQPVKV
APAGKLKCLGSQRERAKNRGSQEGLSVSEPTRMCTRSSSALLEPELSVQSRALLRKGMVS
QRDDGLREMGCSSRHRVNSDSDKCLIQRQGGSNPNLRAHLTRPSSMLNKPSYGLHPEQQI
KSQERLSQEASSYKSVVLRARTRAQGMVLQKDVKQRKSCNLVPSRCLTTRNSSSVPKPQR
QLTPRQEALDYVSEEMTGERLKARNSALRLGGQEDQRCPLTHPLKRKGYCSLSLIPAKRQ
HQMLKANDMRTEKPKPLASPCPSESSHPTAQFEMAEPVQGESSEGTTERCLSKELTATDG
SAQPVLSLKTPPKTKILPPRKGRGLKLEAIVQKITSPNSKSFACSNYSDSNVTCLTLDEI
LSLKEEKLAENSSSEVEQALIEQSKVTAKDASSKIALVELNKKCLIASKRLKEETESQTE
ENSSSQVKADGNLSVGPECVEAEDRQSGKLSPKDRITEEKEGKQLTSPSSILSSVSDPGP
NEEVEHPRGVMELKRQAPPPKRRSHQAASQKVKQAKSNSKPRRPAGRGGRRRRKHLKGSK
STKAAHRRKSQLKRRNLPLVETKEPVIRLKYVSYKMPRAENNAKSFSPYIRVEKSNEVSS
ICTVINTLPEEQSRFQKMKKKSSFSQPPVSVSKTLPTSSAMLPGPVVLDSVRQGCLVCCL
CGRPKNHKELGDLFGPYYPEDYIPPITKNQHVKGKLEIKSEIKERRDGVSAESKGADSDN
ESTVSITAEVPPSLEKAPFSLEKATEVEDQNPLRTSSREKCKKLSCYCCEKTAEDTEPKK
MKKKPGLEEELQAPELPLDPHEHWLHGACAVWTSGVYLAAGKLYGLQEAVEMASEMKCST
CEQVGATLGCYTKGCNQKYHYICAIESGCQLSEENFSMKCTKHKSILSKTL
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgagatcctggggctttccaaagcaaccagcaaaccttccagcaagtc
cgggctgactcatctcggttagacagctataggcaacagaacccggtcgctcaaagctac
gaggcccatgggatcacatcaaaggagtattacaaccagcagtcttaccaaggctacggc
agcaacaccgcgggcacttattacagtggcgtgaaacaagcgtctgctcagcagccgcag
gctcgggctctgagcgcggcatcaagctaccagagtggagcatactcgaggcagtatcag
aacgaaggccaaactccgaaatggggttcccaaggctcttcagtgggcgggctctctcag
tacggccaggactctgcctttaaaagctctgccccctccacggctgctgcctaccaacag
cagcacatgcaaggcaacaccggcaggaccccccctgctctgtccacccaacagagccac
ttcatgcaccaggcccaccacaagtccatcatgggccaggcctccccttacattgccagg
ccagcccaattcaaccagacctttcagtcctctcccagctcctatcccaccgtccaggat
tacagccaaccctcccggtcgtatgagggctatggccaagtgccggcaagttcccagtat
gagaggcagagtgcagccacaccggacttccccagccaggctggctacgcttacaaagct
ggcatggccaagagtgggggctatgagcagaacaaggccgctcaggtcaaacagcatagc
ctccaatatcacaaccaagcaaagttgcaccttctcaatcagtcacctcaagtgtactat
cagccagatgctccggtcaaatctcccgagcagttctatcaaaccttcagccccacctcg
agtcactctcccgtctccacggtggtaagatcaccttcatatagctcaactccctcccca
ttaatggccactcctgagtccctgcaatacggccaggccaccgaagctgacatcaagtcc
aatgtttctcatctgatggcccccgctgtcacttgtaccacacagagttccagcaagacc
ccagggccaagttgcaaggaaaagcttccggagaagttactgtcggatggagctttcagc
agcctcattgccctgagctctcaggtggaaaacattcccaggactgtgcagcagctctta
ctttcaaacaccctcgcccctcacaggaaaatgggcaaacgcctgccgaaaaagtcggaa
atcctaaaggagctgaagagctccgaagagagcctgtattctgaagaagccctgggcaca
cctcagtcagtgcaagctgagctgcaggagggggagtattccagcagctccgaggagcag
ctggacaaaatgcccttcttccaaggccactgcaggaactctgctaacctggacgctttg
aggaagaatctggataccatcctgtcctgctcggttgcctcatctaatgacatggccaca
gactctaagctggacaactctgcccagagtagcgaagcttgcctagcatcggcagacttt
gagaagttggctgccgatagacaagctctcctgttcaccaaggaggatatgaaatcgtcc
agtgttatcattctaaaggactcttccaaggagaggctggagacagaactgaagtttaac
cattttggaggggacaaggaaagtaaagggacacatttcaacctgtacagcgctgagaac
tttgcaggccacttaatccgtgccaaacgtcccggccaaggccaggcccttgtctccgat
tgcaacaagagcacagtgaagagtgactgctcaatgctgacagagggttttggtgacgtc
tcttacagcgaatcccaggcttttccacacaccatagagtgccccaacacaatccagcct
ttagcaggcgattacagagagagcctggtgtctaacagcaaccatgagtgctactcctca
cagattcccggagcccctcaggatttggagaagatgaagtcactcgatttgcccgatccg
aaagggaaagagacccctctggggtgggaggagctcgatgccaacttgtcacagtgtgac
cttcagaagaaataccttcagaaactccaggccaactacaaacaggaaccgagaacgtta
cagaaggattcggctcctgtacacttggtccaagagagggaagaccagagagaagggaac
gaggaggagaagccagagaatggtgggagcagcaactctgagctaagactgcccaccatt
gagcagattgagagcacacggatgaaggtggaagaagatgaggagctcgcagtggaatcg
aaaggaagtgcggttttacaggatataaggaaatctgttatttgtgatgtgtcccccaca
cgtcagagtgttaaggaactggtccctgcacattccgaaggggaatgtagctgctcagag
gacaagctgaacagcaccgagagagaacaggatagagcagcttccagtcccacccctcgc
ttactgccacactccgttatccacgtgggacctgcaataggtgccgagcccaaggtcgga
caaggggacctttcaggagccgagatgaagccggatggtgaaagtggcaagcgcaaagac
actgaggagggcatggtccccgaaccacaggcagtcccccagcctctgggtttcccaaca
cttccgtccgaggtaatcagctcggcgctgaccgaaatagagaatgctcccacgaaggtg
ccggagagcaaagggctgagagtccggagaatgtcgtccagaccggggcaaggagcagct
tttaggggcaaagatcactccccgcccgaaccagcagagaatatccagcccgtcaaggta
gcgccagccggcaaactgaaatgtttagggtcacagcgagagcgagctaaaaacagaggg
tcccaagaaggtctcagtgtctccgagccgactcggatgtgcactcgctcttccagtgct
ttactggagcccgagctgagtgtccagtcccgggctctcttgaggaaggggatggtcagt
cagagggacgatggtctgagggaaatgggctgcagctcacggcacagggtgaactctgac
tcagacaagtgtttgatccaaagacaaggaggttccaatccaaatttgagagcacacctg
accagacccagcagcatgttgaacaaacccagttacggtcttcatccagagcaacagata
aagagccaagagcgcttgagccaagaagctagttcatataaatcggtcgtactgagagcc
agaactagggcccagggaatggttttgcaaaaagatgtcaaacaacgcaagagctgtaat
cttgtccccagtcgatgcttgaccaccagaaatagttcttcagtgcccaaacctcaaaga
caactgacccccagacaagaggcgctggactatgtatcagaggagatgacaggtgaaaga
ttaaaagcacgaaattcagctttaaggctaggggggcaggaagaccaaagatgtccctta
acacaccctttgaaaagaaaaggttactgctccctttcactgatcccggctaaacggcag
catcaaatgttgaaggccaacgacatgaggacagagaaaccaaaaccattggccagccca
tgtccatcagagagcagtcacccaacagctcagtttgagatggccgaacccgtccaagga
gagagcagtgaagggacaactgaacgttgtctcagtaaagagctaacagccactgatggc
agtgctcagcctgttctctccctcaagacccctccgaagacaaagattcttccacctcgc
aaaggtagaggcctaaaactggaggcaattgtgcagaagatcacttccccaaactccaaa
tcattcgcctgcagcaactattcagatagtaacgtgacatgtttgaccctggacgagatc
ctgtccctgaaagaagagaaactcgctgagaactccagcagtgaggtagaacaggcactg
attgagcaaagcaaagtgacggccaaagatgcttcttcaaagattgccctggtagagttg
aataaaaaatgcctcatcgcatccaagagactcaaagaggaaacagagtcacaaactgag
gagaacagcagtagtcaagtgaaggctgatggaaatctatctgtagggccagaatgtgtg
gaggcagaggacaggcaaagtgggaagctttctccaaaggatagaatcacggaagagaaa
gaggggaaacagcttacctccccttcttctattttgtcttctgtttcagatccaggtccc
aatgaagaggtggagcaccctcggggtgtcatggagctgaagaggcaagccccccctcca
aagaggcgcagtcaccaggcagcaagtcaaaaggtcaaacaagccaagagtaattctaaa
cccagaaggcctgctggacgaggtggcagaagaagaagaaagcaccttaaagggagcaag
agtacaaaagctgctcacaggcgaaaaagtcaactgaagagaagaaacctcccccttgtg
gaaaccaaagaaccagtgatacgattaaaatacgtgtcatataagatgccaagagcagag
aacaatgccaagagcttttctccttatattcgtgttgagaagagcaatgaggtatcatct
atctgtacagtcattaacaccttaccagaggaacagtcaaggttccaaaaaatgaagaaa
aaatcttcattctcacagccccctgtatcagttagcaagacattgccaacatcttcagct
atgttaccagggcctgtggtgctagattccgtcaggcaaggctgcctggtctgttgctta
tgtggaagacccaagaatcacaaggagctcggagacctctttggaccctactacccagag
gattatataccacccatcacaaagaaccagcatgtcaaggggaagttggagataaagagt
gaaatcaaagagaggcgagatggggtttccgcggaatcaaagggagctgactcggacaat
gagagcactgtcagtattacagccgaggtcccaccaagtttggagaaggctccattcagt
ctggagaaggcaaccgaggtggaagatcagaatccgcttaggactagctcaagagaaaag
tgcaaaaagctgagttgctactgctgtgagaaaacggccgaagatacggagccgaagaaa
atgaagaagaagccgggcttggaggaggagctgcaggcccctgagctgccccttgacccc
cacgagcactggttacacggagcctgtgctgtgtggaccagcggagtgtacctggctgct
gggaagctgtacggtttgcaggaggctgtggagatggccagtgagatgaaatgttccacg
tgcgagcaggtgggtgccactctgggctgctacaccaaggggtgcaatcagaaatatcat
tatatctgtgccattgagtcaggctgccaattaagtgaagagaatttttcaatgaaatgt
acaaaacataagagcatattgtctaaaacactataa
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integrated database retrieval system
