Rhincodon typus (whale shark): 109914978 Help Entry 109914978         CDS       T06055                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism rtp  Rhincodon typus (whale shark) Pathway rtp04510   Focal adhesion rtp04512   ECM-receptor interaction rtp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rtp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109914978  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109914978   09142 Cell motility    04820 Cytoskeleton in muscle cells     109914978  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:rtp00535]     109914978 Proteoglycans [BR:rtp00535]  Extracellular matrix (ECM) proteoglycans   Others    109914978 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  109914978 NCBI-ProteinID:  XP_048453301 LinkDB All DBs Position 5:74928599..75066073 Genome browser AA seq 680 aa AA seqDB search MESSDSNRGLLYLLLFLQLLRLSFTQVPPGDSTLPGPAGVPGLNGIDGDRGPDGVPGPPG PKGDAGARGSTGLVGPPGKDGLPGQQGSPGTPGQPGPKGEPGAVGPRGAPGEGVPGLPGP PGPSGLPGELGRVGPPGDRGPPGLPGPPGPPGPKGLPALMHGDSSDEPLCPNACPPGLQG YSGLPGMKGHKGVKGEAGEPGKQGHKGEEGEQGVSGELGAQGPPGIQGPRGYAGLDGQKG DMGLRGLDGEPGGFGPIGSPGDVGPQGPLGEPGPKGDPGRPGPRGITGSPGSKGEPGLPG VDGRDGIPGMPGSKGEAGKPGAPGEAGSLGLPGLPGSPGLQGAMGAKGDRGPAGLNGTMG SPGKPGEQGPIGDLGEPGLVGPPGDQGLPGAVGPAGPPGPAGPVGDIGYPGLPGPAGLPG AKGDRGAVGLSGGKGEQGPAGAEGIDGPKGEMGDRGKPGPKGAIGKPGEVGLHGKEGIRG LPGVQGPRGANGVQGLQGDRGLPGLPGRQGPPGKEPTDQHIRQVCMRVMQEHLAHLAASL RRPETGIMGLPGRPGPPGPPGPAGENGFPGQPGPRGLTGLKGPAGIIGYKGQKGEQGEKG DRGFPGRGPRGLPGQQGQPGEPGKNSFGRDGRDGSRGLPGKSGQPGIPGPPGRAGIPGYC EASACTQALRAPPPENMKGP NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt atggagagctcggacagcaacagggggctcttgtatctattgctttttctacagttattg cggctcagtttcactcaagttccgccaggtgattcaactctcccaggtccggccggagtc ccgggattgaatggcattgatggtgaccgaggtccagatggagtcccgggtccaccgggt cccaaaggtgacgccggtgctagaggttcgaccggattggtggggcccccgggaaaagat ggattaccaggacaacagggatcaccaggaacccctggacaacctgggccaaagggtgag ccaggagcagtgggacctcgtggagctcctggtgaaggtgtaccaggactaccagggcct cctggtccatctggacttccaggtgaacttggccgtgttggacctcccggtgaccgagga cctccaggactacctgggccaccaggcccacctggacccaagggacttccagcactgatg catggtgatagcagtgatgagccactgtgtcccaatgcttgccctccagggctgcagggc tattctggacttccaggaatgaaggggcacaaaggtgtgaaaggagaggctggtgaacca ggcaaacaaggacataagggtgaagaaggagaacagggagtttctggagaattaggtgct caaggcccaccaggtattcaaggtcctagaggttatgctggtctggatggacaaaagggt gatatgggtcttcgtggattggatggtgaacctggtggtttcggtcctattggttcacct ggagatgtcggccctcaaggtcctctgggtgagcctggccctaaaggtgatcctggtcgc cctggtcccagaggaattacagggtccccaggatcaaaaggagagcccggattaccaggt gttgatggacgggatggtatacctggaatgcctggatcgaagggtgaagctggcaaacca ggagctccgggtgaggcaggatctctaggtttacctggtttgcctggctctccaggactt cagggtgcaatgggagcaaagggtgatcgaggtccagctggtttgaatggcacaatggga tctcctggtaaacctggtgaacagggaccgatcggtgatctgggagaaccaggtctcgtt ggaccaccgggtgaccaagggctgcctggtgctgttggtcctgctggtccacctggccca gctggtcccgttggtgatattggctatcctggtcttccaggtccagctggtttgccgggt gctaaaggcgatcggggtgctgtaggtttgtctggtggtaaaggtgaacaaggtcctgct ggtgcagaaggtattgatggccccaagggtgagatgggtgatcgaggaaagcctggtccc aagggtgctattggcaaacctggtgaggttggacttcatggtaaagaagggattcgtggt ctgccaggtgtacagggtccccgtggtgctaacggagtacagggcttacaaggagaccgc ggacttccgggcctacctgggagacagggtccacctggcaaggagccaacagaccaacac attcgacaagtgtgcatgagagtaatgcaagaacacttggctcatttggctgccagcctt aggagacctgaaactggtatcatgggtttgccaggacgtcctggacccccagggccccca ggaccagctggagaaaatggcttccctggacaaccagggcctcgtggtcttactggcctc aaaggtccagctggtataattggttataaaggacaaaaaggtgaacaaggagaaaaaggt gatagaggatttcctggaagaggacccagggggttgccaggacaacaaggtcaaccaggg gagcctgggaaaaatagctttggtagagacggtcgtgatggttctaggggcttacctgga aagagtggtcagcctggtatccctggtccacctggtcgtgcagggattcctggatattgt gaagcctccgcctgcacacaagctttacgggcgccacctccagaaaacatgaaaggacca tga

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