Rhincodon typus (whale shark): 109915028
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Entry
109915028 CDS
T06055
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109915028 (tfip11)
Spliceosome [BR:
rtp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109915028 (tfip11)
Other components
Complex C specific factors
109915028 (tfip11)
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF1281
Motif
Other DBs
NCBI-GeneID:
109915028
NCBI-ProteinID:
XP_020370229
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Position
24:30714407..30745132
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AA seq
830 aa
AA seq
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MSMSHLYGKDQDDDEVEMERFEISDWDLENEFNPDRVRHRQTKEDAIYGMWAENDSDDER
PSFGGKRSKDYSAPVNFISAGIRRPAAEENDEEKDSDDSEEEKVKREDFPKEFAPKKLKT
GGFFKSSSKGFTGGHRTNQEIGTWEKHTKGIGQKLLQKMGYVPGRGLGKNAQGIVAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEEAEEEFQKEMSQWRKDPAGGKKKPKYTFK
TVEELKAKGASALGKKMATPQTELSQVKVIDMTGKEQKVYYSYSQMNQKHDIPDDTQSPV
KDAKSEGFSLPELEHNLQLLIEMTEQEIIQNDRQLQYERDMVVNLSHENEKLSEILAHED
KIIDKLSNILQIVEDCEKRLQPNCENPLTLEECAKIFEMLQEKYLEEYKMFDLAELSIAI
VFPLLKEFFKTWNPLQDNTYGLEVMSKWRKLLERDQLQHGGCDMLSLDPYHRLMWEVWMP
CVRNVVSQWLPRNCAPMVDFLENWMPAVPLWILDNILEQLIFPKLQREVENWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKNVFTPGSWEAF
MLKNIVPKLGMCLTEFVINPHQQHMDTFHWVMDWEDMISASSLIGLLEKNFFPKWLQVLC
SWLSNSPNYEEVTKWYLGWKSMFSDQVLAHPTIKEKFNEALDIMNRAVTSTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENLAHRGIGVSSASIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcacatctttacgggaaagaccaggatgacgacgaggtggagatggagcgg
ttcgagatttcagattgggatttggaaaatgagttcaacccagaccgcgtacgccatcgg
cagacaaaagaggatgctatctatggcatgtgggctgagaatgactctgatgacgaaagg
ccaagctttgggggaaaacgttctaaagattacagtgctccagtaaatttcatcagtgct
ggaatccgacgacctgcagctgaggaaaatgatgaagagaaggattctgatgattctgaa
gaggagaaagtgaagcgagaagattttccaaaggaatttgccccaaagaaattgaaaact
ggtggctttttcaaatctagttcaaaaggattcacaggaggacatcgaacaaaccaggaa
attggcacctgggaaaaacacaccaaagggatcggacagaagttgctgcagaagatgggt
tatgtacctggcagaggtctcgggaagaatgcacaaggaattgtggcacccattgaggca
aagatgaggaaggggaaaggagcaattggtgcttatgggtctgaacgaacagagcagtca
ctgaaggattttcctattgttgactccgatgaagaagcagaagaggagtttcagaaggag
atgagccagtggcggaaagatcctgcaggtgggaagaaaaagcccaagtacaccttcaaa
actgttgaagagcttaaagcgaaaggagcatccgccctgggcaagaaaatggctacacca
cagacagagctctcacaagtcaaggttatagacatgacaggaaaagaacagaaagtctat
tacagttacagccagatgaaccagaagcatgatattcctgatgacacacagtctccagtt
aaagatgcaaagtcagagggcttttctcttccagagctggaacacaatctgcaactgctc
attgaaatgactgagcaggagatcatccagaatgaccgtcagctgcagtatgagagggac
atggttgttaatctctcccatgagaatgagaagctgtctgaaatccttgcccatgaggat
aagatcatcgacaagctcagcaatatcttgcagattgtagaggactgcgagaagagacta
cagcccaactgtgaaaatccactgaccctggaggagtgtgcaaaaatttttgaaatgctg
caggagaagtatttggaggagtacaagatgtttgacttagcagaactctccattgctatt
gtatttccactgctgaaagaattctttaagacatggaatcctttgcaggataacacatat
ggtttagaggtcatgtcaaaatggaggaaacttctagaacgagatcagctgcaacatgga
ggatgtgatatgttgtcattggacccttaccacagattaatgtgggaagtctggatgcca
tgtgtccgcaatgttgtatcccagtggctgccccggaattgtgctccaatggtggatttc
ttggagaactggatgcctgcagtgcctctctggatattggacaatattcttgagcaactg
atttttcccaagttgcagcgtgaggttgagaactggaacccactgactgacacagtccca
atccatgcctggatacatccctggcttccattgatgcagatgcgcctggagcctctgtat
tcaccgatccggaataagctttccaatgcattacagaaatggcatcccagtgactcgtct
gcaaaattgatccttttgccgtggaaaaatgtgttcacaccaggatcctgggaagccttc
atgctgaaaaacatcgttccaaagttaggaatgtgtttgacagagtttgtgattaatcct
caccaacaacacatggacacgttccattgggtgatggactgggaggacatgatctcagct
tccagcctcataggattgcttgagaaaaactttttcccaaaatggttacaggtgctatgt
tcttggctgagtaacagtcccaattatgaagaggtcactaaatggtatttgggatggaag
tccatgttttctgaccaggtactggcccaccccacaatcaaggagaagtttaatgaagcc
ctggacattatgaaccgggctgtcacctccacagttggtggttacatgcagccaggagct
cgggaaaacattgcctaccttacccatacagagcgccggagggactttcagtacgaggca
atgcaggagcgccgtgaagcagagaatctggcacaccgtggcattggggtcagctctgcc
tccatacccatgaacttcaaggacttgatccaggcaaaggctgaagagcacaatattgtt
ttcatgcccttgatgggtaaacgccacgagggcaaacagctctacacctttggtcggata
gttatttatattgaccgaggggttgtgtttgtacagggggagaaaacctgggtgccaaca
tcacttcagagtctcattgacatggctaaataa
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