Rhincodon typus (whale shark): 109915035
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Entry
109915035 CDS
T06055
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109915035 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109915035 (vps35)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109915035 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
109915035
NCBI-ProteinID:
XP_048461938
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Position
15:complement(34263517..34422720)
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AA seq
655 aa
AA seq
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MDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQ
YAGNIIPRLYLLITVGVVYIKSFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRN
ILPDEGEESEEVVTGDINDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRIL
VGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDGLAQEYLMECIIQVFPDEFHLQTL
NPFLRSCAELHQSVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQVK
LIFLFPLEDAIFLIQVDAILNLVSTLIQDQPDQPAEDPDPEDFAEEQSLVGRFIHLFQSE
DPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFSAYQLAFCYKENSKVDEKWEKKCQKIF
SFAHQTISALIKAELAELPLRLFLQGALAAGDIGFENHETVAYEFMSQAFSLYEDEISDS
KAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQCRAVSICAHLFWSGR
NTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLFTEILNRYIYFYEKENEAVTIQ
VLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPEADGPIYEGLVL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattaaaacatgcttcgaatatgcttggtgaattacgaacttcgatgctgtca
ccaaagagttactatgagctctacatggccatttcagatgaattgcattatttggaagtt
tatctgactgatgagtttgccaaaggaagaaaggtggctgacctgtatgaacttgttcag
tatgcaggcaatataattccaagactctacctgctcatcactgttggagttgtttacatt
aagtcgttttcccagtccaggaaggatattctcaaggatctggtggaaatgtgtcgtggg
gtgcagcatccattgcgagggctgttcctaaggaactacctacttcagtgcactagaaat
attttgccagatgaaggagaggagtcagaggaagtcgtaactggagatattaatgactcc
atggactttgtgctgctgaactttgcagaaatgaataaactctgggtgcgcatgcagcac
cagggtcacagtagagaccgtgaaaaacgggaacgtgaacgtcaggagctgcgaatccta
gttggtacgaacttagtccggcttagtcagttggaaggagttaatgtggagaggtacaaa
cagattgtgttaactggaatattggagcaagttgtaaactgcagggatggcttggctcag
gagtatcttatggaatgtattattcaggtgttccctgatgagtttcatctgcagacgctg
aatccattccttcgctcttgtgcagagctccatcaaagtgttaatgtcaaaaacataatc
attgcattaattgatcggttggctttgtttgcgcatcgtgaagatggccctggaatccct
gctgatataaaactgtttgatatcttttctcaacaagtagctacagttatacaggtgaaa
ctaattttcttgttccctctggaagatgccattttccttatacaggttgatgcaatactg
aacctggtgtcgacattgattcaggatcaaccagatcagccagcagaagatcctgaccca
gaagattttgctgaagagcaaagtcttgttggtagatttattcatttatttcaatctgaa
gatcctgaccaacagtatctgatcttaaacactgccagaaaacattttggtgctggcggg
aatcaaaggattcgtttcactttgccaccattggttttttctgcctaccagctggccttc
tgctacaaagaaaattcaaaagtggatgaaaaatgggaaaagaaatgccagaagatattt
tcttttgcccaccagactataagtgccctaattaaagcagaacttgcagagttgcctctc
cgtctgtttctgcagggagcacttgcagctggggatattggatttgagaaccatgaaact
gtggcttatgagtttatgtcacaggcattctctctgtatgaagatgaaatcagtgattcc
aaggcgcagctagcagcaattacattgataattgggacatttgagcgcatgaaatgcttc
agtgaagagaaccacgagcctttgaggacacagtgtgcactggctgcttcaaagttgctt
aagaagccagatcagtgtcgtgctgttagcatctgtgctcatttattttggtctgggcgg
aatactgataagaatggagaggagattcacgacggcaagagagtgatggaatgccttaaa
aaggctttgaaaatagccaatcagtgcatggatccatcgctacaagtacagctcttcact
gaaattcttaatcgatacatatacttttatgaaaaagaaaatgaggcggtgactattcaa
gttttaaatcagcttattcaaaaaataagggaagatctcccaaacttggaatccagtgaa
gaaactgagcaaattaacaaacactttcacaacacactggagcacctgcgtctgaggaga
gaatcacctgaagctgatggaccaatttatgaaggtcttgtcttgtag
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