Rhincodon typus (whale shark): 109915080
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Entry
109915080 CDS
T06055
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04020
Calcium signaling pathway
rtp04510
Focal adhesion
rtp04518
Integrin signaling
rtp04540
Gap junction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109915080 (pdgfd)
04020 Calcium signaling pathway
109915080 (pdgfd)
09133 Signaling molecules and interaction
04518 Integrin signaling
109915080 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109915080 (pdgfd)
04540 Gap junction
109915080 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
109915080 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109915080 (pdgfd)
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109915080 (pdgfd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
109915080
NCBI-ProteinID:
XP_048454300
LinkDB
All DBs
Position
6:43618805..43791455
Genome browser
AA seq
370 aa
AA seq
DB search
MLLLFILVTVFGDFRLHGTKAQGGSIKALRSSTIQRDESNHLTAIYRQEDTINVVNNGFI
QSPRFPLNYPRSILLTWRLLSPENTRIQLVFDTRFGLEEPENDICRYDFVEVEDISDTNR
IIRGRWCGNKEVPPKLISKSNRLRITFKSDEYFVAKPGFRIYYSPVDVDDLQPQPSKPNW
EAVTSSVSGPLWHGSASTASPLTVESLDEAIAGFETIEELLRHLDPEFWEEDLNNIFQAT
TGFRGRTFHHQRKTKADLNRMNNDVKRYSCTPRNYSVNLREELKQTNAVFFPRCLLVQRC
GGNCACGTEHWRSCNCMPAKSIMKYHEVLRFIPEPGQPRRRGRNKNMGLVNIQLEHHERC
DCICSSRPPR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttattgctattcatattggttacagtatttggagactttcgccttcatggcaccaaa
gctcaaggtggatctattaaagctttgcgatcctctactatacagagagatgagagcaat
cacctcacagcaatttatcggcaagaagatacaatcaatgtcgtgaataatggatttatt
cagagtccacgatttcctctcaactatccaaggagtattttattgacgtggaggttgctg
tctcctgaaaacacaaggatacagttggtgttcgatacacgttttggactggaggaaccg
gaaaatgatatttgcaggtatgactttgtagaggtggaagacatctctgacacaaaccga
atcattcgtggaaggtggtgtgggaataaagaagttcccccaaaactaatatcgaaaagc
aatagactgaggataacatttaaatcggatgaatattttgtggctaagcctggatttcgc
atttattactctccagtggatgtggacgatttacagccacagccctcaaaaccaaactgg
gaggcggtaacaagttctgtatcggggccattatggcatggctcagcatctactgcctca
ccactgactgtggagtccttggatgaggcaattgctggatttgagacaatagaagagctt
ctgaggcatttagatccagaattctgggaagaagacttgaacaatatctttcaagcaaca
actgggtttcgtggcagaacctttcaccatcaacggaaaaccaaagctgacctgaacaga
atgaataatgatgttaaacgctacagctgtactccacgaaactactccgttaaccttcga
gaagagcttaagcagacgaatgcagtcttcttccctcggtgcctccttgttcaacgttgc
gggggaaactgtgcctgtggtactgaacactggcgatcctgcaactgcatgccagccaaa
agcattatgaaatatcatgaggtgttgagatttattcctgaaccgggtcaaccacgcagg
aggggcagaaacaagaacatgggccttgtcaacatccaattggagcatcatgaacgctgt
gactgcatctgcagttccaggccaccccgataa
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