Rhincodon typus (whale shark): 109915130
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Entry
109915130 CDS
T06055
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109915130 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109915130 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rtp02044
]
109915130 (sec31b)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109915130 (sec31b)
Secretion system [BR:
rtp02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
109915130 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Prp18
Beta-prop_WDR11_1st
SRA1
Motif
Other DBs
NCBI-GeneID:
109915130
NCBI-ProteinID:
XP_048472219
LinkDB
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Position
34:6090007..6183770
Genome browser
AA seq
1245 aa
AA seq
DB search
MKLKEIERTAIQSWSPASHHPLYLATGTSAQQLDATFSTSAALEIYELDFSDPSLDAKLR
GSLPATSRFHKLIWSNHGTSSNGVIAAGGDTGTITLYSAEQILALGNDPIIGQSEKHAGP
VRGLDFNPFQNNLMASGANDSEIYIWDLNNFNTPMTPGAKSQQREPSEDISCVAWNRQVQ
HILASAHPSGRAVVWDLRKNEPIIKVSDHSSRMRCSGMAWNPEVATQLVLASEDDRMPIL
QIWDLRFATSPLKVLENHTRGILSISWCQADPELLLSSAKDNRILCWNPNTGEVVYELPT
SSQWCFDVQWCPRNPAVLSAASFDGRISVYSVMGGSLEAQKQSHVDKISSSFNNLDPFGT
GQTLSLLDIPQKAVLPTVVLPLKKPPKWIRRPVGASFAFGGKLITFSNSKATPPQIQQSV
ARQVFVSVVTTETEFLRRSNELQTALRSEAFVQYCQSKINTAPTDFEKNIWNFLKVNFEQ
DPRTKYLNLLGYSKEGLDKQIASAVGNSVRLKSPEVEANERVQKTPGVSSQSSSSEESVA
AGDASTTSDFFDNIPGERPLFEIPVTGDTEGLISQALLIGNFEGAVELCLKDDHFADAII
LAIAGGEELLAQTQNRYFVKRKTKISRLVSSVVTHNWRDIVESCDLDNWKEALAALLTYA
KPEVFSSLCDTLGSRLEMENEGKLCIQACLCYICSGNVEKLVECWVKTHESSTPLALEDL
VEKIMILRKAIELLQGTDTAAEGPVFAKKLTQYASLLAAQGSLEAAMSYLPPTSHQFTVL
QLRDRLFHAQGEALVGQQPPTFPFSHVVTKGTRPTSTPAPTPARQTPPQRPIQQPTQQAP
FQTSFSPQAPICPSAPTVFTPQPAPVAPPSAVPVQGISGTTTNIYSKPGATRPAYPQHPT
TVGAPAFTQFQNFGQPKVPPSGLPAYPLQNPLPGSRLTGPSLPTASLSGPTIPGVSMPGP
SLMIPASMPSYPSSNTLPPSHTAQPGPLPTYPSHQYQPQPPTSLPGIHSTFPHPSGTGVP
GAPSSKQFTSAAVPPPPPQTGFLPWLQNRSCASGFQDGWNDPPAVRAGQRKKMLPDNYTP
PAPITAPVVNFPADVQQLRPQGFTPQEISQGPPGAPKEANLQPLQQLPTEKVVKKQIPEE
HMVLKTTFDGLVQRCLLAAGDPQTKRKLDDAAKRLDYLYDKLREQTLSPHILSGLHEIVR
NIEACNYQQALMVHTHVVSSSNFSEISAFMPVLKVVVTIANKLNI
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaggagattgagaggacggccattcagtcctggagtcctgcttctcaccat
ccactctatttggctacaggtacttcagctcaacagttggatgctactttcagcacaagt
gcagcattggagatctatgagctagatttttcagatccttcactggatgcaaaattgcga
ggcagcttacctgctaccagtagatttcacaagctgatctggagcaaccatggcacaagc
tctaatggagtcatagcagcaggaggagatacaggaaccatcaccctttacagtgcggag
cagattcttgcattgggaaatgatcctatcattggccagagtgagaagcatgcaggtcct
gttcgaggactggattttaatcccttccagaataatctaatggcttctggagcgaatgat
tctgagatatatatttgggatttaaataatttcaatacaccaatgacaccaggagcaaag
tcccagcaaagagagccttctgaggatatcagctgtgtagcctggaatcgacaggtgcag
cacatcctggcttctgcccatccaagtggcagagctgtggtatgggatctgagaaagaat
gaacctatcatcaaagtcagcgatcacagcagcagaatgcgttgttctggtatggcctgg
aaccctgaagttgcaactcaacttgttcttgcatcagaagatgatcgaatgcctatactg
cagatatgggacttgcggtttgccacgtctcctctcaaggtgttggagaatcacaccagg
ggtattctgtccatatcgtggtgtcaagccgatccagagttgctcctaagcagtgcaaaa
gataataggatcctatgctggaatcccaacactggagaggtggtctacgagctaccaaca
agcagtcagtggtgctttgatgtccagtggtgcccacggaacccagcagtcctctcagct
gcttcctttgatggacgaatcagtgtttattctgtcatgggagggagtctggaagcacaa
aaacaaagccatgtcgacaaaatttcttcctcattcaacaatctggacccatttggaaca
gggcagactctttctcttctagatatcccacagaaagcagttctgcccaccgtggtcctt
cctttgaaaaaaccccccaaatggatccgtcgacctgtgggagcatcatttgcttttgga
gggaagctgatcactttttccaactcaaaagcgactccaccacagatacagcagtctgtt
gcacgtcaagtgtttgtcagtgtggttactacggagacagaatttttgcgccgttccaac
gaactccagacagccctccggtcagaggctttcgttcagtactgtcagtccaagattaat
actgctcctacagactttgaaaagaacatctggaacttcttgaaggtaaactttgaacaa
gaccctcggacaaaatacttgaatttgcttggctacagtaaggaaggattggataagcag
atcgcctcggctgtaggtaacagtgtgagattgaaaagtccagaagtggaggctaatgaa
cgtgtacagaagacgccaggtgtctccagtcagagttcaagctctgaagagtctgtagct
gcaggggatgcctcaacaacttctgacttctttgacaatattccaggggaaagacccctc
tttgaaatccctgtcacaggagatactgaggggttgatcagccaagccttgctaataggg
aactttgaaggtgctgttgaactgtgtctaaaagatgaccatttcgctgatgccatcatc
ctcgctattgctggaggagaagagcttcttgctcaaacacagaacagatactttgtgaaa
aggaagacaaaaatttcacggcttgtgtcctctgtagtcacccacaattggagggatatt
gttgaatcctgtgacttggataattggaaagaagctttggctgctctgttaacttatgcc
aaacccgaagtgttttcttcattatgtgataccctaggatcccgtctagaaatggagaat
gagggaaagctatgcatacaggcatgtctttgctacatctgctccggaaatgttgagaaa
ctggtagaatgttgggtgaaaactcatgaaagctcgactccactcgcactagaggacctt
gtggaaaagattatgatcttacgaaaagcaattgagttactccagggcacagacacggct
gcagagggcccagtctttgcaaaaaaactcacacagtatgccagcttactagccgcacaa
ggaagtttggaagcagcaatgagctacctccctcccacttcacatcagtttacagttctc
cagctccgtgacagactattccatgcgcaaggagaagctctggtgggtcaacagcctccc
acatttccctttagtcatgttgtgacgaaaggtacacgtccaacttccactcctgctccc
actccagctcgacagacaccaccacaaaggccaatacagcaacccacccagcaggctcca
tttcagacctcctttagtcctcaggctccaatctgtccatcagctccaacagtattcact
ccccagcctgccccagtcgcacctccgtctgccgtccctgttcaaggcatttctgggact
accaccaacatctactctaaaccaggagcaacacgtcctgcctacccacagcatcctacc
acagtcggtgcaccagcctttacacagttccagaattttggacagccaaaggttcctcca
agtggtctcccagcctatcctcttcagaatcctttgccaggttcaaggttgactggtcca
tctctacctacagcctccctgagtggcccgacaattcctggtgtctccatgccaggacca
tcgctaatgatccctgcctccatgccatcctatccatcgtctaatacattgccacccagc
cacacagcacaacctgggccactgccaacttacccatctcaccagtatcaaccccagcct
cctacgtctctaccaggcattcactccaccttcccacacccctctggaacaggagtccct
ggagctccgtcctccaagcagttcacatctgcagcagttcctcctcctcctcctcaaaca
ggattccttccatggctacaaaaccgctcttgtgcatcagggttccaggatggatggaat
gaccctccggcagtacgagcagggcaaagaaagaaaatgctacctgacaactacactcct
ccagctcccattactgctcctgttgtgaatttccctgcagatgtccaacagcttcgacct
cagggcttcacacctcaggaaatcagtcaaggacctccaggggcaccaaaagaagccaat
ttacagccgctacagcagctgcccacggagaaggttgtgaaaaaacaaatcccagaagag
cacatggtgttgaagacgacctttgatggactggtacagcgatgccttttagctgctggt
gaccctcaaactaagaggaagttggatgatgctgcaaagcgattggattacctgtatgat
aaattacgggagcagacactttctcctcatattctgagtggactgcatgaaattgtgagg
aacatcgaagcatgcaattaccagcaagcgttgatggttcacacgcacgttgtgagcagc
agcaattttagcgagatttcagcttttatgccagtcctgaaagtggttgttacaatcgcg
aacaaactcaacatctga
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integrated database retrieval system
