Rhincodon typus (whale shark): 109915133
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Entry
109915133 CDS
T06055
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04114
Oocyte meiosis
rtp04120
Ubiquitin mediated proteolysis
rtp04218
Cellular senescence
rtp04310
Wnt signaling pathway
rtp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109915133
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109915133
04340 Hedgehog signaling pathway
109915133
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109915133
04218 Cellular senescence
109915133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109915133
03036 Chromosome and associated proteins [BR:
rtp03036
]
109915133
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109915133
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109915133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
DSE1_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
ANAPC4_WD40
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_DCAF12
F-box-like
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
PAC11
NBCH_WD40
ASA1
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_HPS5
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_NOL10_N
Beta-prop_WDR11_2nd
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR75_2nd
PEP5_VPS11_N
eIF2A
KNTC1_N
WD40_2
DUF1513
DUF4508
DUF6188
Motif
Other DBs
NCBI-GeneID:
109915133
NCBI-ProteinID:
XP_020370325
LinkDB
All DBs
Position
12:complement(12875226..13045162)
Genome browser
AA seq
529 aa
AA seq
DB search
MMEADSVIEDKSIELMNTSGMEDQNEDESPKKNTVWQITNGPPSMIVSRKRPSGNYEKEK
DLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAE
NILSYLDAKSLCAAEVVCKEWQRVIGEGMLWKKLIERMVRTDPLWRGLAERRGWEQYLFK
NRPADGPPNSFYRGLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKI
ISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDEHVIVTGSSDSTVRVWDVNTAEVL
NTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD
KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG
ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSG
RVFRLQFDEFQIISSSHDDTILIWDFLNVPSSNQNETRSPSRTYTYVSR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcggactcggtgatcgaagataaaagtattgagctgatgaatacatcgggt
atggaggatcaaaatgaagatgagtctccaaagaagaatacagtatggcagatcactaat
ggacccccttctatgatcgtctccagaaagcgaccctctgggaactacgagaaagagaag
gatttgtgtattaaatattttgaccagtggtctgaatccgatcaggtggagttcgtggag
cacctcatatcccggatgtgccattaccagcatgggcatattaactcctatctgaaaccc
atgttgcaacgggacttcatcactgctctgccagcccaaggattggatcacatagcagag
aacatcctgtcatacctggatgccaagtcactgtgtgctgctgaggtggtgtgtaaagaa
tggcagcgggtaattggcgagggaatgctgtggaaaaagctgattgaacggatggtgcgc
acggacccgttgtggcggggcctcgcagagaggagaggatgggaacaatatctgtttaaa
aataggcctgctgatggtccgccaaattcattttacagagggttatatccaaagataatc
caggatatagagaccatagaatccaactggagatgtgggaggcacaaccttcagagaatc
cagtgtcgatcggagaatagcaaaggagtttactgtctgcagtacgatgatgagaagata
attagcggtctcagagataactccatcaaaatttgggacaaacagtcgctggagtgtttg
aagatactgacgggtcacacaggctctgtgctgtgcctgcaatacgatgagcatgtcatt
gttactgggtcttcagactctacagtaagggtctgggatgttaatacagcagaggtcttg
aacacactaattcatcacaatgaggcagtgttgcatcttcgttttagtaatggactgatg
gtcacatgttcaaaggacagatctatagctgtgtgggacatggcctctccaactgacatc
actctgagaagggtgttggttggccatcgggcagcggtcaatgtggtagactttgatgac
aaatacattgtttcagcatcaggggaccgaactattaaagtgtggagcacgagtacttgt
gaatttgtgcgtaccttgaatggccataagcgtgggatagcgtgccttcagtatcgggac
cgactggttgtcagtggttcctccgacaataccatcaggttgtgggacatagaatgtggt
gcctgtctgagggttttagaaggccatgaggaattagtgcgatgcattcgatttgacaac
aagaggattgtgagtggagcttacgatggcaaaataaaagtatgggacttgcaagctgct
cttgatcctcgagcccctgcaagtactttatgtctacgcactttggtggaacactctggc
cgggtatttcgactgcagttcgatgagtttcagatcatcagtagttcccatgatgatacc
atactgatctgggatttcctgaatgtgccatcaagtaaccagaatgaaacacgctcacca
tcgaggacatacacctatgtctccagataa
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integrated database retrieval system
