KEGG   Rhincodon typus (whale shark): 109915148
Entry
109915148         CDS       T06055                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03030  DNA replication
rtp03082  ATP-dependent chromatin remodeling
rtp03410  Base excision repair
rtp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109915148 (pole3)
   03410 Base excision repair
    109915148 (pole3)
   03420 Nucleotide excision repair
    109915148 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109915148 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtp03032]
    109915148 (pole3)
   03036 Chromosome and associated proteins [BR:rtp03036]
    109915148 (pole3)
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109915148 (pole3)
Enzymes [BR:rtp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109915148 (pole3)
DNA replication proteins [BR:rtp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    109915148 (pole3)
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    109915148 (pole3)
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      109915148 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone SpoU_methylase CENP-T_C BUD22 TAF CIS_TMP Astro_capsid_p RNA_pol_3_Rpc31 DUF4746 Dala_Dala_lig_N DUF6080
Other DBs
NCBI-GeneID: 109915148
NCBI-ProteinID: XP_020370343
LinkDB
Position
28:complement(4321744..4334614)
AA seq 150 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARSAISRAASVFVLYATSCANNFAMKSK
RKTLSASDVLAAMEEMEFDRFITPLKDALEVYKREQKGKKEASEQKKKDKKPENDEQEKS
KEEENEEDSEEVKMVDDQKEMENEDDDVEN
NT seq 453 nt   +upstreamnt  +downstreamnt
atggctgagagaccagaagacttgaatctaccaaatgcagtcattactaggattattaaa
gaagcgcttccagatggagtgaacgtctcaaaggaagcccgcagtgcaatatcccgagca
gcaagtgtctttgttctttatgcaacttcatgcgcgaataactttgcaatgaagagcaag
aggaaaacactgagtgcctctgatgtgcttgcggcaatggaagagatggagtttgatcgc
tttataaccccactgaaagatgcattggaagtttacaagcgagagcagaaagggaaaaaa
gaagcttcagaacagaagaagaaagataaaaagccagagaatgatgaacaagagaagagt
aaggaagaagagaatgaggaagacagtgaagaggtgaaaatggtagatgatcaaaaggag
atggaaaatgaagatgatgatgtagaaaactga

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