Rhincodon typus (whale shark): 109915148
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Entry
109915148 CDS
T06055
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03030
DNA replication
rtp03082
ATP-dependent chromatin remodeling
rtp03410
Base excision repair
rtp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109915148 (pole3)
03410 Base excision repair
109915148 (pole3)
03420 Nucleotide excision repair
109915148 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109915148 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109915148 (pole3)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109915148 (pole3)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109915148 (pole3)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109915148 (pole3)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
109915148 (pole3)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
109915148 (pole3)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
109915148 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
SpoU_methylase
CENP-T_C
BUD22
TAF
CIS_TMP
Astro_capsid_p
RNA_pol_3_Rpc31
DUF4746
Dala_Dala_lig_N
DUF6080
Motif
Other DBs
NCBI-GeneID:
109915148
NCBI-ProteinID:
XP_020370343
LinkDB
All DBs
Position
28:complement(4321744..4334614)
Genome browser
AA seq
150 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARSAISRAASVFVLYATSCANNFAMKSK
RKTLSASDVLAAMEEMEFDRFITPLKDALEVYKREQKGKKEASEQKKKDKKPENDEQEKS
KEEENEEDSEEVKMVDDQKEMENEDDDVEN
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagaccagaagacttgaatctaccaaatgcagtcattactaggattattaaa
gaagcgcttccagatggagtgaacgtctcaaaggaagcccgcagtgcaatatcccgagca
gcaagtgtctttgttctttatgcaacttcatgcgcgaataactttgcaatgaagagcaag
aggaaaacactgagtgcctctgatgtgcttgcggcaatggaagagatggagtttgatcgc
tttataaccccactgaaagatgcattggaagtttacaagcgagagcagaaagggaaaaaa
gaagcttcagaacagaagaagaaagataaaaagccagagaatgatgaacaagagaagagt
aaggaagaagagaatgaggaagacagtgaagaggtgaaaatggtagatgatcaaaaggag
atggaaaatgaagatgatgatgtagaaaactga
DBGET
integrated database retrieval system