Rhincodon typus (whale shark): 109915154
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Entry
109915154 CDS
T06055
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like
KO
K05478
tumor necrosis factor ligand superfamily member 15
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109915154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109915154
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109915154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
109915154
NCBI-ProteinID:
XP_020370354
LinkDB
All DBs
Position
28:complement(17859576..17864099)
Genome browser
AA seq
244 aa
AA seq
DB search
MQKPTSTDPEDMTFGNSNSTLTQKHSCSSVLLTICVIFQWLAITAMCCLIFFYIDVLKED
INTELLEKMKNITSNNFQTTGNDKFKSSVMKSEKPIAHFTALADFHNTSGRLFFEHTKGH
AFKTPDMKYNEAGYLVIPTNGIYFIYAQVTFNCLQDCSKLIQQFFVSIFKKNNHYQDPEV
LLKSYVRPQAKGDDFVKISTYQGGAFKLYADDHMYVEVPKNSLISALEQETYFGAFLLKP
SASE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcccacctctacagatccagaagacatgacatttgggaactctaacagcact
ctcactcaaaagcacagttgcagctcagtactgctcaccatttgtgttattttccagtgg
cttgctataacagccatgtgctgcctcatctttttctacattgatgtgctaaaggaggac
ataaacactgaactgctggaaaagatgaagaatatcacctctaacaattttcagaccact
ggaaatgataaattcaagagctcagtcatgaaatcagagaagccaatcgctcattttact
gcacttgcagatttccataatacatcaggccgtctgttctttgaacacacaaaaggacac
gctttcaaaacccctgacatgaagtataatgaagctggctacttggtgattcccaccaat
ggtatctactttatttatgcacaggtgacctttaattgtttacaggactgctccaagctc
attcagcaattctttgtctcaattttcaagaagaacaatcattaccaggacccagaagta
ttgctgaaaagctatgtcaggcctcaagccaaaggtgatgactttgtgaagatttcaacc
taccagggtggagccttcaagctgtatgctgatgaccatatgtatgttgaagttcccaaa
aacagcctcatttcagcgcttgaacaagaaacttactttggggctttcttgctaaagcct
tctgcctcagaataa
DBGET
integrated database retrieval system
