Rhincodon typus (whale shark): 109915171
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Entry
109915171 CDS
T06055
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109915171 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
109915171 (pdzd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109915171
NCBI-ProteinID:
XP_048470841
LinkDB
All DBs
Position
1:46849548..47013080
Genome browser
AA seq
1746 aa
AA seq
DB search
MFENKDSSGEGVRIQKEGIKMSNRALYLNTRSFQNNVKIIVDGYDLVAIAEIWLQGGHDW
ELNIQGCRTIRRTDRREEDEKENLITGNKEIAEALNRYFLLVFTVEDTNNLPVIDDKEAK
ISDYLADQCWNGGCIYLIMLRRIKRKAPLPPSNGSNSELRTSSSSSEASGSPTQNGKRTR
KFGVISRSSLNRDSQDSRESHSSEQENGYHVSMEAECSKAEGIDAHCDPKDSDAAVNQIS
EEQISNGITALSTTHQRTRLSETGKTDSRQSEQSTQREGCQIWKMHMVKGSDGLGIQITG
GRGSKRSPHGIIVTYVEEGGAAQRDGRLKSGDELLMINGQSLVGLSHQEAVALLRSAAGL
VQLVVASRDESEIHFQKFPSTSLPDLVTNFVVADNSPSPTENKENVKPDSEDAAADCQVH
HHPESVSETDKGDTHERVEMPQFSCRSPTPGGSVMKFRSRSQGGGSRLESVGEDDELIVE
NGEASCDMSEKPARGGRKHSLPQQLDATGIRQEYQIVKKSARSLSTVHVESPWRLAQPSI
ISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGE
SLQGLTHQQAIQTFKQLKKGVVTLTVRTRLRSPSLTPCPTPTLMSRSSSPNSNASGGTPV
PASEEGDCCRKGPGPKDRIIMEVTLNKEPGVGLGIGACCLTLEKSTPGIYIHSLCPGSVA
KLDGRLSRGDQILEVDSVSLRHAALSEAYAILSECGPGPISLIISRHPNPKVSEQEMDEV
IARTTHRENTSKDGQLSHTTGLSSKSPSPSVKSKQGDGSSLSWTMKRFLEPTSRQGSLSS
ETELSQYFSNHVPSQSSLSDTMLTASSEEEHLRQKSISNSLDDSVLSPLNPVPNEIGVPK
PEVSSISLSNGKSVVPKNKHVEVARQASPGDSPKSIRSPLLRQRRVICYDDISDDEDFVK
VEDSARLKRPQITQKMPEEDSGIIIATSSVEVDDESQDGELLRNVSSDGDLPQCSSSLES
EDSSMEQMVDSPFMPLKFFESSSSTDTNHSNLGIKEGQVESKRSPKLEHKAVTRVKSMMS
IECPQNLSKHKNEEHHSPPTKPIARPLPHSKKTETGDTSVMCCTETVHLTRERSESFGLE
LEIKASPLRVLITGLQPGGAAERESKGKLGAGDEIVFINNTPVFSMPYQETCNFMYNLPS
SITLEVRKPVSAVDRLSTLISSSSTDLNLVEPDTVEIDQNMIANKSNAQMFEDFMKNRTT
SLEVQPLEKPTGDNMVENKVVSQDCSTLPHSQRSDIPVTDIDDVINQLDSVEDDIPNTSP
LNSERSQVDVAAHSIIAINNTNDVSNKGDSSIGITQEVLDYSVLSSVNTGKVFSVNKTCL
TNYSRNLSTEKKDKLLGLTDIKENSKQQSMYAAAVDSDSEAESLDSPHSSCSKVALGLPG
DVVFTQCESLSIADSDTEEVEICFQPSDQAQTPQQFVQLPTNLNQEVLHESDLSMTKLAP
EAGKGTISADKKTNSNLPFSYHENEHSLIYSTPPSNFDMTGVEVAKQSLMPNHMTDRLVE
PIKSESTSILTASYVNDSQNKHLGFDPSSKQNLPINSLEDTGVMTFHNQKDSDKGQCIEE
DTREFDKKLEHHSDSAFSPSKLQSESRLELNRTDDFSSSQDALKHSKKAEITKASHDSLY
PVPKPRLSAISKPNLGSQNVALSMIQVRKERLTLSGSGKNSTPPATKTKSVQTILRSTNW
ETFHAI
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacaaagattcttctggtgaaggtgttaggattcaaaaggaaggtatcaaa
atgagcaatagagcactctacctgaatactcgcagctttcaaaacaatgtaaaaatcatc
gtggatgggtatgatttagtggccattgcagagatatggttacagggtggtcacgactgg
gagttaaatatccaggggtgtcggactattcgaaggacagacagacgggaagaggatgag
aaggagaatttaataacgggaaataaggaaatagctgaggcattgaacaggtattttctg
ttggtcttcaccgtggaggacacgaataacttgccagtaattgatgacaaagaggctaag
ataagtgattacctggctgaccagtgctggaatggcggatgcatttacctgatcatgctg
cgtcggattaaacgcaaagctcctcttcctccttccaatggcagcaacagtgaactcagg
acaagcagtagcagctcggaggcaagtggaagtccaacgcagaatggcaaacggactcga
aagtttggtgtcatctctcgttcttccctcaatcgagatagccaggacagtcgggagagt
catagctctgagcaagagaatggatatcatgtctccatggaggcagaatgttcaaaggct
gaagggattgacgctcattgtgaccccaaagactctgatgcagctgttaaccagatatca
gaagagcaaatttctaatggaatcactgccctatcgacaacacatcaaagaactcgactc
tcagaaactgggaagacagactctagacagagtgaacagtctactcagagggaaggttgc
caaatttggaagatgcacatggtgaaaggctcagacggacttggtattcagattacagga
ggtcggggatccaaacgttcaccccatggcatcattgttacatatgttgaagaaggagga
gcagcgcaaagggatggaagactgaaatctggtgatgagctgctaatgattaatggacag
tcactggttggactctctcaccaagaggcagtggcactacttcgatcagcagcaggactt
gtacagctggttgttgcaagcagggatgaatctgagatccatttccagaagttcccctcc
acaagtttacctgatttggtgactaactttgtggttgctgataactccccctctcctaca
gaaaataaagagaatgtaaaaccagacagtgaagatgcagcagctgactgccaagtgcat
caccatcctgaaagtgtttcagaaactgacaaaggcgatacccatgagcgtgtagaaatg
ccacagttcagttgtcgaagtccaacaccaggcggcagtgtaatgaaattcaggagcaga
tctcaaggcggagggagccgcttggaatctgtgggtgaagatgatgagctgatagtggaa
aatggtgaagcaagttgtgacatgtcggaaaagccagcacgaggaggccgcaagcattcc
cttccccagcagcttgatgcaactggtattcgacaggagtatcaaatcgtaaaaaagtca
gcacgttccttaagcacagttcacgtggaatcaccatggcggctagcccagccatcaatc
atctcgaacattgtcctaatgaaagggcaaggaaagggtcttggtttcagtatagttggt
ggccaggattctgctcgaggacggatgggaatatttgtcaaaactatttttccaaatggt
gcagctgctgctgatggaagactgaaagaaggagatgaaattctagaagttaatggggaa
tccctgcaaggactaactcatcagcaggcaattcaaaccttcaagcaactgaagaaagga
gtagtgactcttactgttcgtactaggttgcgcagtcctagccttactccttgtcccact
ccaaccttaatgagtcggtccagctctcccaattccaatgctagcggtggaactccagtc
ccagcatctgaagaaggtgactgctgtcgcaaaggaccagggccaaaagatcgtatcata
atggaggtgacattaaataaagagcctggagttgggttggggatcggggcctgttgtctt
acattagaaaaaagcacaccaggaatctacatccatagcctttgcccaggatcagttgcc
aaattggatggcagattgagccgaggtgatcaaattttggaggtggactcagtaagcctg
cgacatgcagctctgagtgaagcgtatgcaattctaagtgaatgtggcccaggccctatt
agccttattattagccgtcatccaaacccaaaggtctcagaacaggaaatggatgaggtg
atagcacgtacgacacatcgggagaacacaagcaaagatggacaactatcacacaccaca
gggttatcttcaaagagtccatcgcctagtgtgaaatccaagcagggtgatggatcttct
ctcagttggacgatgaaacgttttctggaacccacaagtcggcaagggtcattgagttca
gaaacggaactctcccagtacttttccaatcatgttcccagccagtcgtcactctcagat
acaatgttaacagcttccagtgaggaagaacatctccggcagaagagcataagtaactca
ttggatgacagtgttctttctcctctaaatccagtgcccaacgaaattggagtgccaaag
ccagaggtgtcctccatctcccttagcaatgggaaatctgttgtacctaagaacaaacat
gtggaagtggctcgacaggccagtccaggtgacagccccaaatcaattcgcagccctctt
ctacggcagagaagggtcatttgctatgatgacatcagtgatgatgaagactttgtgaag
gttgaggatagcgctcgactcaaacggcctcaaatcacacagaagatgccagaggaagat
tcaggaattattatagccacgtcttctgttgaagtggatgatgaaagccaagatggtgag
ttgttgagaaatgtcagcagcgatggtgacctacctcagtgcagcagctcattagagtct
gaggacagctcaatggagcaaatggttgactcgcccttcatgccacttaaattctttgaa
tcgtccagttccactgacactaatcatagcaaccttgggatcaaggagggtcaggtggag
tccaagcgatcacctaaacttgaacacaaagctgtcactcgagtgaagagcatgatgagc
attgaatgcccacaaaacctctcgaagcataagaatgaggagcatcattcacctcccacc
aagcccattgcaaggccactgcctcatagcaaaaagactgagacgggagacacctcagta
atgtgctgcacagaaacggtacatctcacacgtgaaagatcagaatcatttggattggag
ttggaaatcaaggcttctcctttaagagttctgataacaggtttacaaccaggtggagca
gcagagagagaatctaagggaaagcttggtgccggagatgaaattgtcttcattaataac
acaccggtctttagcatgccttaccaagagacttgcaactttatgtataacctcccatcc
tccatcacacttgaagtacgcaaaccagtatccgctgtggacagattatcaacgctcatc
tcatcatcttctacagatctgaatttagtagaacctgatactgtagaaattgatcaaaat
atgattgccaacaaaagcaatgcacaaatgtttgaagactttatgaaaaacagaacaaca
agcttggaagtgcagcccctggaaaaacctactggagacaatatggtggaaaacaaagta
gtttcacaggattgcagtaccttgccacacagtcaaagatctgacatcccagttacagac
atcgatgatgttatcaatcaattagattctgttgaggatgacatcccaaatacttcacct
ttgaattcagaaaggagtcaagttgatgttgctgctcattcaataatagctatcaacaac
acaaatgatgtcagtaataaaggtgactcttcaataggcatcactcaagaagttcttgac
tattctgttctaagttcagtcaacaccggcaaagtattttcggtaaacaaaacatgtctg
actaactattccagaaacttaagtactgagaagaaggacaaactattgggtttaacagac
atcaaggaaaatagtaaacaacaatccatgtatgctgctgcagtggactctgattcagag
gcagaatctttggatagccctcattcatcctgtagtaaagtggccctgggtttacctgga
gatgttgttttcacgcaatgtgaaagccttagtattgcagattcagatacagaagaggtt
gaaatctgcttccagcctagtgatcaagctcaaacaccacagcaatttgtgcaacttcca
acaaatctgaaccaggaggttctgcatgagagtgacttgtcaatgactaagcttgctcca
gaagcgggtaaagggacaatttcagcagataaaaagacaaattcaaatctgcccttttcg
taccatgaaaatgagcatagtttaatctattccaccccgccttccaattttgatatgact
ggagtagaggttgccaaacagagcctaatgccaaatcatatgactgatagacttgttgaa
ccaataaaatctgaaagcacaagtatccttacggcttcttatgtaaatgattcacaaaat
aaacatttaggatttgatccttcttccaagcagaatctgccaataaattctctggaagac
acaggtgtgatgacctttcataatcaaaaagattcagacaaaggccaatgtatcgaagaa
gacaccagggaatttgataaaaagttggaacatcacagtgattctgccttttctccatca
aaacttcagtcagaatcacgtttggaattgaatagaacagacgatttttcttcatcacaa
gatgccttgaagcattctaagaaagcagaaattacaaaagcaagtcatgattccttgtat
ccagtgcccaagcccaggttatctgctataagtaagccaaatttgggttctcagaatgtt
gccttatctatgattcaggtcagaaaggaaagactgactttgtcaggtagtggcaaaaat
tctaccccccctgccacaaagacaaaatcagtccaaacaatccttaggagcacaaattgg
gaaaccttccatgccatttaa
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integrated database retrieval system