Rhincodon typus (whale shark): 109915222
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Entry
109915222 CDS
T06055
Name
(RefSeq) T-cell immunoreceptor with Ig and ITIM domains-like
KO
K16350
T-cell immunoreceptor with Ig and ITIM domains
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109915222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109915222
Cell adhesion molecules [BR:
rtp04515
]
Immunoglobulin superfamily
L1 family
109915222
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
DUF6377
Psg1
K319L-like_PKD
DAG1
Vpu
Big_7
Ig_2
DUF3377
Motif
Other DBs
NCBI-GeneID:
109915222
NCBI-ProteinID:
XP_048459134
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All DBs
Position
11:45496314..45545618
Genome browser
AA seq
213 aa
AA seq
DB search
MIKTVVVYLLIVTGVQTKQLCNNRNVTVMEGQSATLRCNTSEDAKIALVEWKKSSNKTRL
AVYSSNSTYYNVERIKMEVNHHCSTISIEETLKSDEDWYFCIFQTFPNGKQDCKIYLEVK
EEEKFQASSYLVIYIVISVVLAVLVIGMILLLIRYVHLRKSRVNIPNQINIILKITDDTD
NQDSKLQLNRPMVTNNQCEDTGIDYNYMSVSLQ
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaacggttgttgtctacttgctgattgtgactggtgtgcaaacaaagcaactt
tgcaataataggaatgtaacagttatggagggtcagtcagctacgttacggtgtaacact
tctgaagatgcaaagatagcattagttgaatggaagaaatccagcaacaaaacaagactt
gccgtgtacagttcaaacagtacatattataatgttgaacgaataaaaatggaagtcaat
catcattgttccacaatctcaattgaagaaactctcaaatcagatgaagactggtatttt
tgtatatttcagacctttccaaatggaaagcaagattgcaaaatatatttggaagtaaaa
gaagaagagaaattccaagcctcttcctatctagtcatttacattgtcatcagtgtggtt
ctggcagttctagtcattggcatgattctcctactgatacgctatgttcatctgaggaag
tctagagtcaacattccaaaccaaatcaacattatcctgaaaatcacagatgacactgat
aaccaagacagcaaattacagctgaacaggccaatggtaaccaacaatcaatgtgaagac
acaggcattgattataattatatgagtgtctcattgcagtga
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