Rhincodon typus (whale shark): 109915223
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Entry
109915223 CDS
T06055
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like isoform X1
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109915223
04121 Ubiquitin system [BR:
rtp04121
]
109915223
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
109915223
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109915223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2HC_2
zf-met
BTB_KLHL33
zf-C2H2_15
zf-C2H2_2
zf-C2H2_jaz
Zf-C2H2_ZNF451_2nd
zf-Di19
Zf-C2H2_ZNF451
zf-C2H2_11
zf-C2H2_ZNF462_1st
HNH_5
BolA
Motif
Other DBs
NCBI-GeneID:
109915223
NCBI-ProteinID:
XP_020370429
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Position
11:complement(45578459..45860939)
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AA seq
681 aa
AA seq
DB search
MAHEFLSSHKEIFKMVATYICSGNINGKGMTERIHSINLHNFSNSVLETLNEQRNRGHFC
DVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLR
VSQSEALQILTAASILQIKTVIDECTRIVSQTVVSSGYSTTRDSNQVTPRGTPESGSSSQ
SSDTESGYVQAHSQRNVERIYSSLYACSGMPVQNGTGERSHYSAPVISHHSTQLVMQREE
NLTDPTWITRIQERTQQMERYLSTPETTHCRKQLRPVRIQTIVGNVHIKQEAEDEYDYDY
YGQQKRNTSEQNESEECNEDTDQAEGTESEPKGESFDSGVSSSNGTETDPIDQQFIAGIS
RVGQSDARPAEQNELPAEDSQQPSSVNPSSPDRVYENEMDTTGPQSSDGNIANEKELHQA
AMNSLISVTQSTQPLATTQLYLRQSDTLATNLRMPLTLTSTTPVIGTAGSTYIPTLFTTQ
STTSGKLFQFTLPQPLTSQQTQFITVPQPNLTNFTTQLHPQQSQSTMQGTSGQTEKKPYE
CTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCNIC
NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHGTGCSEVTTYVCSVC
PAKFDQIEQFNDHMRMHVSDG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgaatttctttcttcacacaaggagattttcaagatggtggccacttacatc
tgcagtggtaacatcaatgggaagggaatgacagagcgcattcacagcatcaaccttcac
aacttcagcaactctgtgcttgagacactaaatgagcagcgaaaccggggccatttctgc
gatgtgaccgtcagaatccatggcagcatgctcagagctcatcgctgtgtgttggctgct
ggcagtcccttcttccaagataaacttcttttgggctacagtgacattgagatcccatct
gtagtctcagtgcagtctgttcagaagttgattgacttcatgtacagtggagttctccgg
gtgtcccaaagcgaagccttacaaatcctcacagcagccagcatactgcagatcaaaaca
gttattgatgaatgcacccggattgtgtctcaaacagtagtgagcagtggttactctaca
acaagggactcgaaccaagtaacaccacgaggaacaccggaatctggttcatccagtcag
agtagtgatactgaatctggctatgtacaagcccactcccagcgtaatgttgaaagaatt
tattcctccctttatgcctgctctggaatgccagtacaaaatggcacaggagagagatcc
cactacagtgctccagtgattagccatcacagcacacaacttgttatgcagagagaagag
aatctaactgatccaacatggataacaagaatacaagaacgaacgcagcaaatggagaga
tatctttccactccggaaactacacattgccgcaagcaactgcggccagttcgtatccaa
accatcgtgggcaatgttcacatcaagcaagaggctgaagatgaatatgattatgattac
tatgggcaacagaaaagaaacacttcagaacaaaatgaatctgaagagtgcaatgaagat
actgaccaagctgaaggtacggagagtgagccaaaaggagaaagctttgactctggtgtt
agctcttccaatgggactgaaactgatccaattgaccaacagttcattgctggcataagc
agagtgggacaatcagatgcaagaccagctgagcagaatgagcttcctgctgaagacagc
cagcagcctagcagtgtgaatccttcttccccagatagagtttatgaaaatgaaatggac
accacagggcctcaaagcagtgatggaaacattgcaaatgaaaaagaattgcatcaagct
gcaatgaactctctgatttcagtgacacaaagcactcagcctctggcaactactcagctt
tatctgaggcaatcagacacgcttgccaccaatttgagaatgccactgacattaaccagc
actactccagtcattggcactgctgggagtacatacataccaacactttttaccactcag
agcactaccagtggcaaactgtttcagttcaccttgccacaacctctgacaagccaacaa
acacaatttataacagttcctcaacccaatcttacaaattttactacacagttgcacccc
caacaatctcagtcaacaatgcagggtacaagtggacaaactgaaaagaaaccctatgaa
tgcactctttgtaataaaaccttcactgcaaaacaaaactatgtgaagcacatgtttgtc
catacaggagagaagccacatcagtgcagcatttgttggcgatctttttcactgaaggat
tatttgattaaacacatggtaacacacactggtgtgagagcctatcagtgtaatatctgc
aacaagcgattcacccaaaagagctccctcaatgttcatatgcgacttcaccgtggtgaa
aaatcctacgagtgctacatctgcaaaaagaagttctcccacaagaccctactggagagg
cacatggcactccatggcactggttgctctgaggtgactacatatgtctgttctgtctgc
ccagccaagttcgaccaaatcgaacagttcaacgaccatatgagaatgcacgtttctgat
ggttaa
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