Rhincodon typus (whale shark): 109915298
Help
Entry
109915298 CDS
T06055
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109915298 (ap5b1)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
109915298 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
109915298
NCBI-ProteinID:
XP_048470940
LinkDB
All DBs
Position
31:26801575..26817940
Genome browser
AA seq
926 aa
AA seq
DB search
MAVSNSEWSQKVAAFYANPSHFLASTTAENFVCDLLRVLADEKISENVKVQVLGIIQEFP
GRLFTSSRVAEQAAESIFSIYSQLPFVPKSVNLKCHLLLSVTTIVIATDHLTSNEKILNN
LMGQLLDAVCDANDCKYGGHFRPLRALACNCLREFETCYPGLLSTKLEILHTLQQKEVSL
LHQVYTLLYIQVLKNAIRTLSRSRVVSEGAIRELLMRNEEIKWEVMEKPQDLLAITATTN
LSPLPVTVETKELKSSVTLLLEESFLLTPVSQAALFHELIQVVLMVRSLSPAIFRSQLLR
LFGTMDISLMHTMLHMKASFTDSLFSAEDENFLLKRLVCMAQHPLLSNPLKLFYMDCLLH
FPENRPINSNLEENLPVLFTPKMAACLFPTLFNDSSTMLSRLNLVSLMCLDSAEEERGLA
EIFDYLVSLYKLVDADGSRGHTVTFFQVVYIFVSCFHASEIYMSELTQYMVKLYQRHCTL
APHMINLIDSIQHLLEDSKWPVSLGDALRKLIVELPSEQLSPHKLIWHLKVLARVAKEPT
ITQKATVQFLLNVVRASDMCGLGEWRMGNAVLSVCRSILHHQNVKPIFSDLADLLQHIHV
QFQDIDIQDHAHFYYALLTCLSHEKLAGIVAPGSGNCNRAKARSLSSLMSESAGHSISVL
PIKHPVLKLIPVPEEGPSNNNPTGDTDMNYYEEDSLEKYLNQFQNVGFASAVVMNFHLTF
AEKVDPDYHKIYTVHLHFDLRSIHYEPLSDLHVPCLFLNRNPHVFSLAFKPHLPFPVTLH
TRAVFTTEDGSTCCSQLEPVDIGFACLFLAPPVPTNWPSKMKAQLFSQLWESLLQTGSSQ
SVLSRFCFTIARRPLSELTNLHFKKYVVSQQTDPESYKIFLFLPPRVHLLLSVEQVDNVA
KVDIVTDNWQLLPFINSYLIDITSEK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcaaattctgagtggtcccagaaagtagcagcattctatgctaatccgtca
cattttcttgccagtacgacagctgagaactttgtttgcgatctgctgagggtcctggca
gacgagaagatcagtgaaaatgtaaaggttcaggttctcgggataattcaagagttccca
ggacggctgttcaccagctctcgggtggctgagcaagcagcagagtctatcttcagcatt
tactcgcagctgccctttgtacccaagtcagtcaatctgaaatgccacttgctgctttca
gtcactaccatagtcattgccactgaccacctgaccagcaacgagaaaatactgaacaac
ttgatgggccaactgcttgatgcagtgtgtgatgctaacgattgcaaatacgggggacat
ttccggcctctcagggccctggcgtgcaactgccttcgagaatttgaaacgtgctaccca
ggtctgctgtcaacgaaactggagatcctacataccctccagcaaaaggaagtcagtctg
ctgcaccaggtctacacactgctatacatacaagtgttgaaaaacgcaatccgcacgctc
tcgcggtcacgtgttgtgtcagagggagccatccgtgaactgttgatgaggaacgaggaa
atcaaatgggaagtgatggaaaagccacaggatttattagccatcaccgcaaccaccaat
ctatctccattaccggttaccgttgaaacaaaggagttgaagtcttccgtgactttgctg
ctggaggagtccttcctcctaactccagtatcccaagctgcattgtttcacgagttgatc
caggtggtccttatggtgcgctcactttctccagccattttccgatcccagttactgcgt
ctgtttgggacaatggatatctccttgatgcacaccatgctgcacatgaaggcaagtttc
actgacagtcttttcagtgctgaggatgagaacttcctgttgaagcgtctagtctgcatg
gcccagcatccattgctcagcaatcccctcaagctcttctacatggattgcttacttcat
ttccctgaaaaccgccccattaactctaacctcgaagagaatcttccagttttgttcacg
ccaaagatggcagcttgccttttccccacactatttaatgatagcagcacaatgctgtct
cgtctcaacttggtgagtcttatgtgccttgacagtgctgaggaggaaagaggacttgct
gagatctttgattacctcgtgtccttgtataaactggtggatgccgatggaagccgagga
catactgtgacatttttccaagttgtgtatatatttgtgagttgcttccatgccagtgaa
atttacatgtcagagctgactcaatatatggttaaactgtaccagagacattgcacctta
gctccacacatgattaatctcatcgatagcattcagcacctcttggaggattcaaagtgg
cctgtttcattgggggatgctttgcgcaagctgatcgtcgagctcccatccgagcaacta
tctcctcataaactcatatggcacctcaaggtccttgcaagagtggccaaagaacccacc
ataacacagaaagcaacagttcaatttttactgaacgttgttcgagcttctgacatgtgc
gggctgggtgagtggaggatgggtaacgcagtcttgtctgtgtgcagaagcattctgcat
caccagaacgtgaagcccatcttcagtgaccttgcagacctcctgcagcacattcacgtc
cagttccaggacattgacattcaggatcatgcccatttctattatgctttactcacctgc
ctctcccacgagaagctggcaggaatcgttgcaccagggtccggcaactgtaatcgggca
aaggcacgatcactctcatccctaatgtcagagagtgcaggtcactccatttctgttctt
ccaataaaacacccagtactgaaactcattccagtcccagaagaaggtccttccaacaac
aatccaactggagacacagacatgaactactatgaggaagattccttagagaaatacttg
aatcaatttcaaaacgttgggtttgcttctgccgttgtgatgaacttccatttgactttt
gcagagaaagtcgatcctgattatcacaaaatctacactgtgcatttacattttgacctg
aggagcattcactatgagccgttgagtgatctccacgtcccctgtctcttcctaaacaga
aatcctcatgttttctccttggctttcaagccacatctcccttttcctgtcactttacac
acgagagcagtctttaccacggaggacggcagtacatgttgtagccagctcgagcctgtt
gacatcggctttgcctgtttgttcctggcccctcccgtaccaacaaattggccgtcgaaa
atgaaggctcaactctttagccagttgtgggaatccttgctgcagactggatccagccag
tctgttctcagtcgcttctgttttacaatagctcggagacctctgagtgaactcacaaac
ttgcactttaaaaaatatgtggtttctcagcaaactgacccagagtcttacaaaattttt
ctgttcctaccccctcgagtccatcttttgctcagtgtggagcaggtggacaatgtggca
aaagtcgacattgtcactgataactggcagcttttacccttcattaattcttacctgatt
gacataacgtctgaaaaatag
DBGET
integrated database retrieval system