Rhincodon typus (whale shark): 109915423
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Entry
109915423 CDS
T06055
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
rtp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109915423 (sap18)
03015 mRNA surveillance pathway
109915423 (sap18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109915423 (sap18)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109915423 (sap18)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109915423 (sap18)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109915423 (sap18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
109915423
NCBI-ProteinID:
XP_020370632
LinkDB
All DBs
Position
6:complement(38359392..38372957)
Genome browser
AA seq
167 aa
AA seq
DB search
MVRSPSLRERRVGNMAVESRVTQEEIKKEPEKPVDREKTCPLLLRVFTTNNGRHHRVDDF
ARGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFSFAIVYPDPKRPGYRVKEI
GTTVSGRKGPDDSMTLQSQKFQIGDYLDIAITPPSRAPPPPGRMRPY
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggtcgccatcgttgagagagcggcgggtagggaatatggcggtggagtctaga
gtcacccaggaggagatcaagaaagagccagagaagccggtggatcgcgaaaagacatgc
cctcttctgttgagagtgttcacaactaacaatggaaggcatcacagagtcgatgatttt
gctagaggaaatgtcccatctagtgagctacagatctatacttggatggatgctacactg
aaagaactaacaagcttagtaaaagaagtctatccagaggcccgcaaaaaaggaacacat
ttcagctttgcaattgtgtatccagatccgaaacgacctggctacagagtgaaggaaatt
ggtacgactgtttcagggaggaaaggaccagatgactcgatgacgttacaatcgcagaaa
tttcaaattggggactacctggacattgcaataacgccacctagtagagcaccgccccca
cctggccgcatgagaccatattaa
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integrated database retrieval system
