Rhincodon typus (whale shark): 109915473
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Entry
109915473 CDS
T06055
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04514
Cell adhesion molecules
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109915473
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109915473
09142 Cell motility
04810 Regulation of actin cytoskeleton
109915473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109915473
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109915473
04515 Cell adhesion molecules [BR:
rtp04515
]
109915473
04090 CD molecules [BR:
rtp04090
]
109915473
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109915473
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109915473
Cell adhesion molecules [BR:
rtp04515
]
Integrins
Integrin beta subunits
109915473
CD molecules [BR:
rtp04090
]
Proteins
109915473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
109915473
NCBI-ProteinID:
XP_048455430
LinkDB
All DBs
Position
7:complement(15263490..15295595)
Genome browser
AA seq
700 aa
AA seq
DB search
MEIINPQNDMEFQMNKPLVNSATNVIQIKPQKVKLFLRRGSPQKIEVKFKRAEGYPVDLY
YLMDLSYSMKDDLENVKSLGGKLLEALTSITKSSKIGFGSFVDKTVLPFVNTHPEKMKNP
CPTKTEACQRPFNFRHVLKLTNDSNVFTSEVGKQSISGNLDPPEAGLDAMMQAAVCVDQI
GWRNVTRLLVYTSDDGFHFAGDGKLGAILTPNDGKCHLDSDGFYADNTKYDYPSVAELAL
KLAENNIQPIFAVTGKIMPVYRELSEMIPKSAVGELNADSSNVVQLITAAYNNLSSTVIL
AHKTLPDGVHISYTSHCSDGDITSEKEGTCSNVKINKEISFTITVTAHKCLTNKQSFEIR
PLGFTEKLEISLQMRCNCKCDDKPDLSVYCNNKGQIKCGVCSCTEDRIGKFCECDPGQRS
TQDLDAACRKDNSSATCSNQGDCVCGACICHTNPNKKIYGQYCQCDDQNCERNLGKLCAG
HGQCDCGKCLCDKGFGGTACECANADEQCKETRNSTTCSGRGNCTCNQCKCIAGYQPLFC
KECPGCPSPCPTYVHCIECLGFSSGPFKENCSFACVNIKHELKEELEEENACKEKDSKNC
WMNFVMKELDGVSQYHVLIKKQTECPKPPNVIAIVAGGVVGVLLIGLAILLIWKLVTELY
DRREYKKFEKERAKSKWNEADNPLFQKATTTVYNPNFNED
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaaattatcaacccacaaaacgacatggaatttcaaatgaacaaaccacttgttaat
tctgcaactaatgtgatacagataaaaccacagaaagttaaactctttcttcgacgaggc
agtccacagaaaatcgaagtgaagtttaagcgtgctgaaggttaccctgtggacttatac
tacctcatggacctgtcctactccatgaaagatgatctggagaatgtgaagagcctggga
ggaaagcttctggaagcactgacgagtatcacaaagtccagcaaaattggatttggttcc
tttgtggacaagacagtcctaccatttgtcaatacgcatccggagaagatgaaaaatcca
tgtcctactaaaactgaggcgtgtcagcgtccctttaattttcggcatgtcctgaagtta
acaaatgattcaaatgtattcacttctgaagttgggaagcaatctatttcaggaaacctg
gatccaccagaggccggactggatgccatgatgcaggcagcagtgtgtgtggaccagata
ggatggcgcaacgtcacacgccttcttgtatacacttcagatgatggatttcattttgcc
ggagatgggaaacttggagcaattctgacccctaatgatggcaaatgtcatcttgacagt
gatggcttttatgcagataacactaaatacgactatccctctgttgccgagttagctttg
aagttggctgaaaataacattcaacccatttttgcagtcacgggaaaaataatgccagta
taccgggagctgagtgaaatgattccaaaatctgcagtaggtgaactgaacgcggattcc
agtaatgtggttcagctgataacagctgcctataataatctatcttccacagtgatatta
gcacacaaaaccctgccagatggagtccacatctcttatacatcacattgtagtgatgga
gatatcacgagtgaaaaagagggaacttgttcaaatgtgaagattaataaggagataagt
ttcacaattacagttactgcacacaaatgcctgaccaataaacagtccttcgagattcga
cctttgggcttcactgagaagttggaaatttcactgcaaatgcggtgcaactgtaaatgt
gacgacaaacctgacttgtctgtttattgcaacaataagggtcaaatcaagtgtggtgta
tgcagctgcacagaagatcgaattggcaagttctgtgagtgtgatcctggtcagcgttcc
actcaagatctggatgcagcttgccgtaaggacaactcctcagcaacctgcagtaaccag
ggagactgtgtatgtggtgcttgtatttgccatactaaccccaataagaaaatatatggc
cagtactgtcagtgtgatgaccagaactgtgagcgaaacctgggtaaactgtgtgctggt
catggtcaatgtgattgtggtaaatgtctctgtgacaaaggctttggaggaactgcgtgc
gagtgtgcaaatgctgatgagcaatgcaaggagaccagaaacagtactacttgcagtgga
agaggaaattgcacatgtaaccagtgtaaatgtattgccggttatcagcccctattctgc
aaagaatgccctggctgtccatctccatgccccacctatgtacattgcattgagtgtctt
ggattttcgagtggcccattcaaggaaaactgctcttttgcatgtgtcaatataaaacat
gagttaaaggaagaactggaagaagagaatgcatgtaaagagaaagactccaagaactgc
tggatgaattttgtgatgaaggagttagatggggtttcacagtatcatgtgcttatcaag
aagcaaacagaatgtcctaagcctccaaatgtcattgctattgttgctggtggagtggtt
ggtgtgcttttgattggattggcaattctcctaatctggaaactggtgactgaactctac
gacagaagagaatataaaaaatttgaaaaggagcgagcaaaatcaaagtggaatgaagct
gacaatccattgtttcagaaggcaaccaccactgtttataatcccaacttcaatgaagac
tga
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