Rhincodon typus (whale shark): 109915623
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Entry
109915623 CDS
T06055
Symbol
gpc6a
Name
(RefSeq) glypican-6a
KO
K08112
glypican 6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109915623 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
109915623 (gpc6a)
Proteoglycans [BR:
rtp00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
109915623 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
Others
109915623 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
109915623
NCBI-ProteinID:
XP_048454358
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All DBs
Position
6:complement(67155077..68047874)
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AA seq
507 aa
AA seq
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MSGICSLLAVLCTLVTVLGGSVLGDAKARSCTEVRQAYSAKGFSLSNIPYQEISGEHLRI
CSKGFTCCTSEMEDKLSQQSKLEFENMVEETSHVLRTTFVSRHKKFDEFFRELLENSEKS
LNDMFIRTYGQLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLNDFWARLLERMFQLVNPQ
YQFTEDYLECISKYTDQLQPFGDVPRKLKIQVTRAFVAARAFVQGLTVGREVANRVAKVI
PTLGCIRALMKMMYCPYCHGLPTVKACNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVA
ERLEGPFNIEAVLDPIDLKISDAIMNMQDHSLQVSAKVADVKEKLKLAKKFWSTLPYTIC
NEDKVTAGVPDEEDCWNGHTKGRYLPEIMNDGLTNQNNNPEVDVDITRPDTMIRQQIMAL
RVMTNKLKNAYNGNDVNFQDSIDETSGSGSGSGCTDEMCSPESDISITEAPPGPNKSEPK
DSSVRPCLHWLVILVTSVLLILQRQWR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggatctgttctctactggcggtgctctgcactttagtgacggtccttggtggc
tcggtgctgggtgatgcgaaagcccggagctgtactgaggtgaggcaggcttacagtgcg
aaaggattcagcctcagcaacatcccctaccaagagatatcgggggaacatctgcgaata
tgttcaaaaggtttcacatgctgcacctcagagatggaggataagctgagccagcaaagc
aaattggagtttgaaaacatggtagaagaaaccagtcacgttctgcgtacaacatttgtt
tccaggcataagaaatttgatgaattcttcagagaactgttggaaaattctgagaagtca
ctaaacgacatgtttatccggacgtatggccaattgtacatgcaaaactcggaagtgttc
caggatctcttcgcagagctgaaacgctactacacaggtggcaatgtgaacctggaagag
atgcttaacgatttctgggcccgtctactggaacgcatgttccagctggtaaacccccag
taccagttcactgaggattaccttgaatgcatcagcaaatacactgaccagctccaacca
tttggagacgtgcctcgcaagctgaagatacaagttacaagggcttttgttgcagctcgg
gcctttgtgcaaggtctgaccgttggcagggaagttgccaacagagtagcaaaggtcatt
ccaacccttggatgtatccgcgcactaatgaagatgatgtattgtccctactgccatggt
ctccccactgtgaaagcctgcaacaactactgtctgaatgtaatgaagggctgcctggcc
aatcaggctgatttggacacagagtggaatctttttattgatgctatgctcttggtagcg
gaaaggttggaaggacctttcaacattgaagccgtcctggatccaattgatttgaagatt
tctgatgccatcatgaatatgcaagatcacagcttgcaagtgtcagctaaggttgctgat
gttaaggagaaactgaagttggctaagaagttctggtccacattaccttacaccatctgt
aatgaagataaagtgactgctggtgtacctgatgaagaggactgctggaatggacatacc
aagggcaggtacttgcctgaaattatgaatgatggtctgaccaatcagaacaacaaccca
gaagtagatgtggacatcacgagaccagatacaatgatacgtcagcagatcatggcactc
agagtgatgaccaataaactgaagaatgcttataatggaaatgatgtaaacttccaagat
tcaattgatgaaactagtggttctgggagtgggagcggttgcacggatgaaatgtgttct
ccagagtctgatatttcaataactgaggctccaccaggacccaacaagagtgaaccaaaa
gattcttctgtcagaccctgcctgcactggctggtcatacttgtcacctctgtactcctg
atactgcaaagacagtggagataa
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