Rhincodon typus (whale shark): 109915638
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Entry
109915638 CDS
T06055
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109915638 (irx2a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109915638 (irx2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
109915638
NCBI-ProteinID:
XP_020370879
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Position
2:104897030..104901026
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AA seq
458 aa
AA seq
DB search
MSYPQGYLYQPAGSLALYSCPAYSASALTAPRSDELGRASSGSAFSPYAGSAAFTAPSTG
FTNPLQYSTDPATGFPSYMGSPYDAHATGMAGTLSYHPYGNAAYPYQLNDPAYRKNATRD
ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSEDEEEEESGESERNKEGSLKKKHEQNETSAEDEGISLHVDTLTDSSCSPECEGDKVCR
VEDSVCESGSETKEKCDNCIDDDDAVGDDDDGSDEEQEERDLSHKAMNSSPLTRMDAALL
HVPEDENSGSRTKHSLNSIITSASQTQVSKPKLWSLAEIATSDIKQQFGQICSPSPNSSS
STSSSTYPATSILGRPIYYTSPFYTNYTSYANFNHLQSQGILRYSTNETVLNTVSMHKQS
TDSLKNTSSQLEQHFRATNYDSKKDPSDVCTVGVQPYL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcctcagggttatctgtaccagccggcaggttcgctggctctttactcgtgc
ccggcgtacagtgcttccgctctgaccgccccgaggagcgacgagctgggcagagcctcg
tccggctcggcgttcagtccctacgcgggctcggcagcattcacagccccctctacaggc
ttcactaatccgcttcagtactcaactgaccccgctactggattcccgtcctacatgggt
tccccatacgatgctcacgctacagggatggctggaaccctcagttaccacccgtacggt
aatgcggcgtatccttatcaactcaacgacccggcttacaggaagaacgccacacgagac
gccacggccactctcaaagcctggctgaacgagcacaggaagaacccctacccgactaaa
ggagaaaagatcatgctggccatcatcacgaagatgaccctgactcaggtctccacctgg
tttgccaacgccaggaggagactcaagaaagagaataagatgacctgggctccgaggaac
aagagcgaggacgaagaagaggaagaatcgggggagagtgaaagaaacaaggaaggaagt
ttgaagaaaaaacacgagcaaaacgaaacatcagccgaggatgaaggcattagtttgcac
gttgacacgctgactgacagctcctgctccccagaatgtgaaggggacaaagtgtgcagg
gtggaggacagcgtttgtgaatctggctccgaaacgaaggaaaaatgtgacaattgtatt
gatgatgatgatgccgttggtgatgatgatgatggcagcgacgaggagcaggaggagcga
gacctttctcacaaagccatgaactcttcgcctctcactcggatggacgccgcactcctt
cacgtgccagaagacgagaactcggggagtagaaccaaacacagcctaaacagtatcatc
acctctgcttcacagactcaagtcagcaaacccaaactttggtctttagcggaaatcgcc
acctcggatattaaacagcaattcggacagatttgttctccgtcgccgaactcctcttca
tcgacctctagctctacctacccggccacttcaatccttggcaggcccatttactacact
tcacccttttacactaactatacgagctacgccaactttaaccatctgcaaagccaaggc
attttacgatacagcaccaacgagactgtcttaaacactgtctccatgcacaaacaaagt
actgactctctgaaaaatacgagttcccagctcgaacaacacttcagggccacaaattac
gactccaaaaaagaccccagtgatgtctgcacagtaggagtgcaaccatatctatag
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