Rhincodon typus (whale shark): 109915666
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Entry
109915666 CDS
T06055
Symbol
lmbrd1
Name
(RefSeq) lysosomal cobalamin transport escort protein LMBD1 isoform X1
KO
K14617
LMBR1 domain-containing protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04977
Vitamin digestion and absorption
rtp04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
109915666 (lmbrd1)
04980 Cobalamin transport and metabolism
109915666 (lmbrd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109915666 (lmbrd1)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
109915666 (lmbrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
ANC1_spectrin
YPEB_N
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
109915666
NCBI-ProteinID:
XP_048452555
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All DBs
Position
5:75521031..75781799
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AA seq
543 aa
AA seq
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MGSLLTESVWGWSVFALVFLAILVFCWTYIRRYQSQQESEVVSTITAICALAVALITSSL
LPVDIFLVSYMKDPRGSYKEWAADNITRQNIEDTVLYGYYTLYSIILFCVFLWIPFVYFY
YEEKEDEDPSKCSQVKNALKYTLGFVFICSILLLIGAFVPLKVPANQNSTEWEKVKFLFE
ELGSSHGLAALSFSISTLTLIGMLAVITYTAYGMSALPVNLIRGTRNVVYERLQNTEDLE
EVEQQVETIKSKCMDGRPLSMEDRKALQKLQEKLRTLRRRDRHLETAERSCWLKFCCAVR
PFKIALGIFFILVALLFIVALFLSNLDKALHSVGFDSGFIIFETNLENPLNKLLLVLQIV
FPLDYVLIAIITMYLVFTSMAGIRNMGIWFFWIRLYKIRPGRTRPQALLFLCMILLLMVL
HTSYMIYSLAPQYVMYGSQKYQEHVNHTSFSLRQGNSNATWVTKMCDAKAPEDQCTVTRT
YLFLHKFWFFNVVYYFGNWAFIAVFLIGLIVSCCKGKRSVIEGEVDDDDSDLSDDNLMER
HHV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgcttctaaccgagtccgtgtggggttggtctgtattcgccttggttttcctg
gcaattttagttttttgttggacatatatccgtcgataccagagtcagcaagaaagtgaa
gttgtctccaccataactgccatttgcgcacttgctgttgcactgattacttcgtcattg
ctgcctgttgacatattccttgtttcttatatgaaagatcccagagggtcttacaaggaa
tgggcagctgacaacatcacaaggcagaatattgaagacactgtactctatggatattac
accttgtactccatcatcctattttgtgtcttcctctggatcccatttgtctacttctac
tatgaagagaaggaggatgaggatcccagtaaatgttctcaagtgaagaatgcactgaaa
tataccctgggttttgtgtttatctgttccatccttctcttgattggtgcattcgttcct
ttgaaagttccagcgaatcagaactccacagaatgggaaaaagtgaaatttttatttgag
gaactgggaagcagccatggtttggctgccttgtctttctcaataagcaccttaaccttg
attggtatgctagcagtaataacttacacagcttatggaatgtctgcattgccagtaaac
ctgataagaggtacaaggaatgtggtttatgaacgactgcagaacactgaagaccttgaa
gaagtggaacagcaagtggaaacaattaaatccaagtgcatggatggccgtccactgtcc
atggaggaccgaaaagctttgcagaagctgcaggagaagttgcggacacttagaagaaga
gacagacacctggaaactgcagagagaagttgttggttgaagttttgttgtgctgtacga
ccctttaagattgctctagggatatttttcatcttggtggcccttctgttcatcgttgct
ctctttctgtcaaacttggataaagcactccattcagtgggttttgattctggctttata
atatttgaaactaacttggaaaatcctttgaataaattgttgcttgttctacagatagtt
ttcccactggattatgtcctaattgcaatcatcacaatgtacctggtcttcacttccatg
gctgggatccgaaacatgggaatctggtttttctggataaggctgtacaagattagacct
ggccgcacacgaccgcaagctcttctttttctttgcatgatcctgttacttatggttctg
cacacaagttatatgatttacagtctggcaccccagtacgttatgtatggaagtcaaaag
tatcaagagcatgtcaatcatacttcatttagcttgaggcaagggaattcaaatgcaact
tgggtgacaaagatgtgtgatgccaaggcacctgaagatcagtgcacagtgacaaggaca
tatctcttccttcacaaattctggttcttcaatgttgtgtactactttggcaattgggca
tttattgctgtcttcctaattgggctaattgtctcatgttgcaaagggaaacgttcggtc
attgagggggaggtagacgatgatgattctgatttaagtgatgataatctcatggagaga
catcatgtttaa
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