Rhincodon typus (whale shark): 109915694
Help
Entry
109915694 CDS
T06055
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109915694 (caprin2)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109915694 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
109915694
NCBI-ProteinID:
XP_048463647
LinkDB
All DBs
Position
18:6723971..6779786
Genome browser
AA seq
1027 aa
AA seq
DB search
MVRLGILTPESRAASYCGSSEMKMKADKGSPSSGGASSQGPAPFIQALAAANSQYQAYET
YLENGMICLKHKIRNIEKRKAKLDDYKERLKREELNQDQLDAVAKYEEVIHNLEFAKELQ
KTFVALNQELLKAQKKTLRREQLLRTEMEKRRLRTVLHVKYVLENFKQEHVQNDFRDGIN
GAFIISRKEISLLKDFCKLVCPERDERMSLEDQVELVSNQMWDLLEGTDKIVAGSTYKHL
KETISRLLNCTYFDNIPVPHNGLLDDVEDDKIKEVQVTSKALSGKDSESDLHFLCSNDVQ
PREFLNRQYMNKTDYAVKQPEKPRNWENEYVGRKQEDVPKKWDTDYISRKHEESPPARWD
DDYVDKQEESLKKRDTEYINNRKLEEQPKKWDGQYAEVQETKRWESPSVQKESAEPKRIL
PEPKEKRDRTSKQSEAKQVSKVVQQAAAEFCSTSSLPKDPELRRQKLQDLMSQIQGTCHF
IQDSMLDSDSSSPSAIGSQKATISLNAAVPKQQKQQKSETIPSPPKPASELTVHSSVGGS
SGSDDQSSLSGSTNDLSGQTPQNSAARNSESEAYIPPSQIYQTSTPITESLTQKSLETSQ
VTTLPNNQTAVYDAIMVTPQGLGRQTPVSNSPVSMKTTPFQAMQTVFNVNAPLPPRSEQE
VKSDAPYSPAFNQSLITASTQTPPQPVSVQSSHAVEQNALTQDSLTEEPTSVANGTPVFL
PHSQPNPLPRPNQPYFGSRGAVRGAARSGRGIANAYRGSSNGYKGVQIGFDGYRGIPMPG
NGTYGPFPNREYPGMPYAPRESAYQQNYKRGTGVGPRGTMRGAEWKIFQPLAGPNYSTAG
WSDSSQMNSPEQDSEHFNSGDSGQGDSRSITPVDVPGTGQAATLLPVHVYPLPQQMRVAF
STARTSNFTPGSLDQPIIFDLLLNNLGETFDFQMGRFTCPVNGTYVFIFHMLKLAVNVPL
YVNLMKNDEVLCSAYANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFS
GYLLYQD
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctcggtatcctcactccggaatccagagcggcaagttactgcggtagcagc
gagatgaagatgaaagccgataaggggtcgccttccagcggcggggcctcgagccagggg
ccggcccccttcatccaggctctggccgccgccaacagccagtatcaggcgtacgagacg
tacctggagaatggcatgatctgcctcaagcataagatccggaatattgagaaaaggaag
gcaaaactggatgactataaggaacgcctaaaacgagaagaactgaatcaagatcaattg
gatgctgtggcgaaatatgaagaagtaattcataatctggagtttgctaaggaactgcag
aaaacctttgttgcactcaaccaagagctgctaaaagcacaaaagaaaactttacgacgt
gagcaactgctgaggacagaaatggagaagagacgccttcgtacagtattgcatgttaaa
tatgtactggagaacttcaagcaggagcatgttcaaaatgacttcagagatggcattaat
ggtgcatttattatttctcgaaaggaaatcagcctcctcaaggacttctgtaaacttgtt
tgccctgaaagggatgaaagaatgtctcttgaagatcaggttgaattggtgtcaaatcaa
atgtgggacctgttggaaggaactgataaaatagtggctggtagcacctataaacacttg
aaggaaacaataagcagactactgaactgtacctactttgataatattccagtccctcac
aatgggttgctggatgatgttgaagatgataaaattaaagaggtacaagtaacttctaaa
gccttgtctggaaaggattctgaatccgatctacattttttgtgctccaatgacgtgcag
ccaagagagtttttgaatagacaatacatgaacaaaactgactatgctgtaaaacagcct
gaaaaaccaaggaactgggaaaatgagtatgttggcaggaagcaagaagatgttcccaaa
aaatgggatactgattacatcagtagaaaacatgaggaatcgccccctgcaaggtgggat
gatgactatgttgataaacaggaggagtccctcaagaaaagagatacagaatatatcaac
aacagaaagttagaggagcagcccaaaaagtgggatggacagtatgctgaagtccaggag
acaaaaagatgggaatcaccatctgttcagaaagaatctgctgaaccaaagagaattctg
cctgaacccaaagagaaacgggatcgtacatcaaaacaaagtgaagcaaagcaagtgtcg
aaggtagtgcaacaggctgctgcagagttctgctcaacctcgtcactgccaaaggatcca
gaactcaggaggcagaagcttcaagacctcatgtcccagatacaagggacatgtcatttc
attcaggattctatgttggattctgactcttcctcaccaagtgctattggatcacagaag
gctacaatatcactcaatgctgcagttccaaagcaacagaagcagcaaaagagtgaaacc
attccatccccaccaaagcctgcttcagaattgactgttcattccagtgtcgggggtagt
tcaggttctgatgaccagtcttcactatctggttccacaaatgatctttcagggcaaaca
ccacagaattcagctgcacgcaattcagaaagtgaagcatacattcctccatcgcagata
taccaaacaagtacacccattactgagtccctgacacaaaagtccttggagacaagtcag
gtgactactctgcccaacaaccagactgctgtgtatgatgcaataatggtaacacctcaa
ggcctgggacgccagactccagtaagcaattctccagttagcatgaagaccacacctttt
caggctatgcagactgtgttcaatgtgaatgctcctcttcctccaagaagtgaacaggaa
gtgaaatctgatgctccatattcacctgcctttaatcaaagtttgattacagcaagtact
cagactccacctcagcctgtgtctgtccaatcttcacatgctgtggagcaaaatgctctg
acacaagattctttaacagaagaacctacttcagttgccaacgggaccccagtttttcta
ccccacagtcagccaaatcctttaccaagaccaaaccaaccctactttggaagcagaggt
gctgtaaggggagctgcacgaagtggcagaggaattgctaatgcctaccgtggttctagt
aatggatataaaggtgtacaaataggatttgatggctacagaggaattcccatgcctggc
aacggaacatatggaccttttccaaatagggagtaccctgggatgccatacgctccaagg
gagtctgcttaccaacagaactacaaacgtggcacaggagttgggcctcgtgggacaatg
agaggagcagagtggaagatttttcaacctttagcaggtcctaattactcaactgcaggg
tggagcgattcatctcagatgaacagtccagagcaagacagtgagcacttcaacagtggg
gattctggacaaggggactcgcgaagcattactccagtggatgtgccagggaccggtcaa
gctgccaccctcttgcctgtacatgtctaccctcttcctcagcagatgagagtggccttc
tccactgcaaggacctctaactttacccctggatccctggaccagcccattatctttgac
cttctactcaataaccttggagaaacatttgattttcaaatggggcgatttacctgccct
gtgaatggcacctatgtcttcatctttcacatgctgaagctagctgtgaatgttccactc
tatgtaaacctcatgaagaatgatgaagtcctgtgctcagcttatgccaatgatggtgct
ccagatcatgagactgccagcaaccatgctgttctgcagcttttccagggagatcagatc
tggcttcgattgcacagaggtgccatctacggtagcagttggaagtactctaccttttct
ggctacctcttgtatcaggactga
DBGET
integrated database retrieval system