Rhincodon typus (whale shark): 109915705
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Entry
109915705 CDS
T06055
Symbol
klhl42
Name
(RefSeq) kelch-like protein 42
KO
K27973
kelch-like protein 42
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109915705 (klhl42)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
109915705 (klhl42)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_6
Beta-prop_ATRN-LZTR1
BTB
Kelch_2
BTB_KLHL33
Kelch_3
Kelch_5
Kelch_4
NANM
BACK
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
109915705
NCBI-ProteinID:
XP_020370954
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All DBs
Position
18:26828875..26843398
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AA seq
466 aa
AA seq
DB search
MSSEEIIAIIIDDKTYNVSKSKLIEKSDYFKALYNSGMKESEEDSVQLQGLSAHGLELVI
EFINTSKVHFDNEILEDLVETASFLQVSSILKLLLSEVKVDNCVELYKLSEIYGIADLRK
ACLKFMVCHYHPMLRRQEFSHLPNTLRQQVREMRLKGTAVLVAVGDFFSTSLDQSPDEAW
SMLRYDEVGQRWLPLANSLPHDMVNVRGYGSIVLNNYLFIVGGYRMTSQEISAAHCYNPC
KNEWNQIAPMNQKRSNFKLLAVSEKLYAVGGQSLCNVECYNPEMDWWSFVASMPDPLVEF
SACECKGMIYVMGGYTTRGRNMNILRYCPTSDAWTVLESCELHIRKQQMVSVEDIIYLVG
GCIHEKDGSRKGSHTEDMLTIQSYNVNTREWLHLKENTSKSGLNLTCTLHNDGIYIISRD
IAPTTSLEHRVFLKYSLFSDMWEAFRRFPAFGQNTLLCSLYFPNII
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaagaaatcatagctatcataatagacgataagacgtacaatgtcagtaag
agtaagttaattgagaaaagcgattattttaaagccctgtataactccgggatgaaggaa
tctgaagaagattcggtgcaactgcaaggcttgagtgcgcatggactggagctagtcatt
gaattcatcaacacttccaaagtacattttgataacgagatcttggaagatttagtggaa
acagcatcttttctccaggtgtcttccatcttgaagctgctcctttctgaggttaaggtg
gataactgcgtggagttatataaactttctgaaatttatggaatcgctgatctgagaaag
gcctgcctcaagttcatggtgtgtcactaccacccaatgctgaggaggcaggaatttagc
catctacccaacactttgcgtcaacaagtcagggagatgcgccttaaaggcacagctgtc
ttggtggcagtaggggatttctttagcacctccttggatcagtctcctgatgaggcttgg
tcaatgctgagatatgatgaggttggacagagatggctacccctggcaaacagcctccct
catgacatggtgaatgtgagaggctatggttccatagtgctgaataattaccttttcatc
gttggtggatacagaatgactagtcaggagatctcggctgcacattgctacaatccttgc
aaaaatgaatggaatcagattgcaccaatgaatcaaaaaagatcgaattttaaacttcta
gctgtaagtgagaaattgtatgcagttggtggtcagtccctttgcaatgttgaatgttac
aatccagagatggattggtggagttttgtagcttcaatgccagatcctcttgtggaattt
tcagcctgtgaatgcaaagggatgatctatgtaatgggtggatacacaactcgaggtaga
aatatgaacattttgcgatactgccctacctcagatgcttggactgtattagaatcctgt
gagcttcatattcgtaaacaacaaatggtgtctgtggaagatataatttatcttgtgggt
ggctgcatccatgagaaagatggaagtagaaaaggaagccatactgaagatatgcttacg
attcagtcctacaatgtgaacactagggaatggctccacctcaaggaaaacacttcaaaa
tctggactaaatttgacttgtacattgcacaatgatgggatctacattattagcagagat
attgcaccaacaaccagccttgaacatcgtgtattcctcaagtatagtctattttcagat
atgtgggaagcattccgacgttttccagcatttggacaaaatacattactttgctcgttg
tatttccctaatataatttaa
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