Rhincodon typus (whale shark): 109915846
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Entry
109915846 CDS
T06055
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109915846 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109915846 (slc24a1)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
109915846 (slc24a1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
109915846
NCBI-ProteinID:
XP_048471726
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All DBs
Position
33:complement(34130152..34172894)
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AA seq
752 aa
AA seq
DB search
MYLSRRRRLCCNRVLFLVSGLIICSVHQLLSGNLELSGPRTASREAGDGEASPSPGQLVT
RSRKLLQTTGSSSATALTPSPGASSPGTPTPGASSPGTPTPGAPAPGTPPRGTPSPGATS
PRTPSPGTPAPGGSTPTIPKPRTHNSGNRTPRAPNPNPGPPAPRTPSPWTSKPGTRTPSP
GIIPSSIPLGHSKGEYPMDLFSVEQRRHGWVVLHATGMVYMFIALALVCDEFFVPSLGEI
IEKLQISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCA
IFSREILHLTWWPLFRDVSFYILDLIMLIIFFLDNLIEWWESLLLLSAYISYVCFMKFNA
KMERWFKGNIINNNNVVKVMSMMNPVKPKAILTRGSSTPSLHNSMLRNTIFQLMINTLDP
LAEVKFKQKAEIMNSLAKGKGSSKDQQGNNMKEEREETDFPNMVNVEVTPPTDPSSPSSP
TEGAEDEENLIKDQETNDQCEDAGNNDGDENDGSDSDSEDSDEDDDSDEDSDEEDNEEEE
EEETNEEEPLSLEWPDTRRKQVTYLCLLPIVFPLWLTVPDVRNAASKKYFIGTFFGSILW
IGAFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSV
GSNIFDITVGLPVPWLLYATFHRFTAVPVSSNGLFCAIVLLFLMLLFVIISIGFSKWKMN
KFLGFTMFCLYFTFLIISVMLEDRIIVCPVSI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgagccggaggaggaggctttgctgtaaccgggttctgtttctggtttccgga
ttgatcatttgctccgtccaccagctgctgagcggcaacttggagctttcaggaccgcgg
acagcgtccagggaagcaggagacggcgaagcgtcaccctccccgggccaactggtcacc
cggagccgcaaactcctgcaaactaccggtagcagcagcgccacagccctgaccccctct
cccggggcctcctctcccgggacccccactcccggggcctcctctcccgggacccccact
cccggggcccccgctccagggaccccccctcgcgggaccccctctcccggggccacctct
cccaggaccccctctcccgggacacccgctcccgggggctcgactccaacgattcccaaa
cccagaactcacaattccgggaaccgcactcccagggcccccaaccccaatcccgggccc
cctgctccccggacccccagtccctggacctccaagcccgggacccgcactccctctccc
gggataatcccaagcagcatccctctcggccatagtaagggcgagtacccgatggacctg
ttcagtgtggaacagcgcaggcatggctgggtggtcctgcacgccactggcatggtttat
atgttcattgctctggcgctggtctgcgatgaattctttgtcccgtctttaggggaaatt
atcgagaaactgcaaatctcggacgatgtggccggggccacgttcatggcagcgggaggc
tctgctcccgagctcttcacctccctgatcggagtcttcatctcccacagtaacgtgggc
atcggtaccatcgtgggctcggccgtctttaacatcctcttcgtaatcgggatgtgtgca
atcttctcccgcgaaatcctgcacctgacctggtggcccctgttccgggacgtgtccttc
tacattttggatctgatcatgttaatcatcttcttcctggacaatctgatcgagtggtgg
gaaagtctcctcttactgtctgcctacatcagctacgtctgcttcatgaaattcaacgcg
aaaatggagcgctggtttaagggcaacataattaacaacaataacgtggttaaagtgatg
tcgatgatgaacccggtcaagcccaaagcgattctaactcgaggaagcagcacgccatca
ctacacaacagcatgttgcggaacactatctttcagctcatgatcaatactctggacccc
ttggctgaagtgaaatttaagcagaaggctgaaataatgaacagtttggcaaagggcaag
ggaagttcaaaagatcaacaaggaaacaatatgaaagaagaaagagaggaaacagatttt
cccaacatggtgaatgttgaagtgactcccccaactgacccatcaagtccatcatcacca
acagaaggtgccgaggatgaagaaaatctcattaaagaccaggaaacaaatgatcagtgt
gaagatgctggaaataatgatggtgatgaaaatgatggcagtgatagtgattctgaagat
agtgacgaggatgatgacagtgatgaagatagtgatgaggaggataatgaagaagaggaa
gaagaggaaaccaatgaagaagaacctttgagtcttgaatggccagacacccgacggaaa
caggtcacttacctgtgcctacttcctatcgtgttcccgctctggctaacggtgcctgat
gtacgaaacgcagcttcaaagaaatactttattgggaccttttttggatctattctgtgg
attggtgctttttcatatttgatggtgtggtgggcccaccaggttggtgagacaattggt
atttctgaagagataatgggtttaaccatccttgctgcgggcacctctatccctgacctc
atcactagtgtcattgtcgctcgcaaaggtctgggggacatggcagtgtccagctcagtg
ggaagcaacatctttgacatcacagttgggcttcctgtgccctggttgctgtatgctacc
tttcacagattcactgcggttccagtcagcagtaatggcctgttctgtgccattgttcta
ctcttcctgatgttgctgtttgtaatcatttccattggcttctcaaagtggaagatgaac
aaattcttgggcttcaccatgttttgcctctactttacgtttttaatcatcagcgtgatg
ttggaggacagaatcatagtatgcccggtttccatatga
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