Rhincodon typus (whale shark): 109916008
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Entry
109916008 CDS
T06055
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04517
IgSF CAM signaling
rtp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109916008
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109916008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109916008
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
109916008
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Paralog
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Motif
Pfam:
ADIP
TolA_bind_tri
MCD
Motif
Other DBs
NCBI-GeneID:
109916008
NCBI-ProteinID:
XP_048474067
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Position
38:complement(3520192..3538731)
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AA seq
598 aa
AA seq
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MGDWKVTSIVEAGNPPDAKSFILRPASPFSPASTITLHRSPVLPLPNLFNQNVFCWGDNV
EECVLYLSKELNKLGLPALFDDSFEENPASSFSLVSLINGVYGLLHLYRKNATKVDGLEM
ERLKSFSEQDCLKNSQFKLQEQVAALEQEIATLATKEEQRQKSIRNLNNQLKSQKEEIAK
LQSVIASRAAQYLHDLKRKEQELSKLKEKMNHHLTDKKDKRIAIDILNHIGRADGRRPLW
RTGKTESRREEEMYKVLATNYEAQIQELVLDNAELMRVLNQMKRELRGFLSPDKLCQANS
PPSLEEETSVNESQEATRGHLAYCVQKQWNTLKDHMAKLGVVAMQTSPVVGKNDHVVSIT
DHDKEIANLKLELEQSKEIIYAQQHLLEDQLAIQKEDLTRGSDLLEEEEWFYKERQLFEE
QSKNFEMERQRFTEAAIRLGQERKQFEEERALYLKEQFLNLTPFRDQRTKPKRKPQTSFV
VTSPDQENLSPHLPTQKISMSRRCQHASMHTPSPSFKCTKLRRHSLPAGHELYEVLIETC
FRPAPTEQLKKPSSMRESPSNQRDSATQTRTGLRWIGTGFFLNEHDDSLCCGHLCSPI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggaaagtcacgtctatagttgaagctggaaatcccccagatgcaaagagt
ttcatcctgagacctgcttcaccgttctcccctgccagcaccataactctgcaccgttct
ccagtgctgccacttccaaacctgttcaatcaaaatgtgttctgctggggtgataatgtt
gaggaatgtgtcctgtacctaagcaaggaactgaataaactgggtcttcctgctttgttc
gacgatagttttgaggagaatccagcttcaagctttagccttgtctctctaataaatggt
gtgtatggcctgctgcatctctaccggaaaaatgcaaccaaagtagatgggttagaaatg
gaacgtttaaagtctttcagtgagcaggattgtctgaaaaacagccagtttaaactgcag
gagcaggtggcagcattggagcaggaaattgctactttggcaacaaaggaggagcaaaga
cagaagagcatcaggaatttgaataaccagctgaagagccagaaggaggagatagcaaag
ttacagagtgttattgcaagtcgggcagcacagtaccttcatgacttgaagaggaaggag
caggaactgagcaaactgaaggagaagatgaatcaccatctgacagacaaaaaggataag
agaattgctatagatatcctgaatcacattggacgagctgatggaagacgccccttgtgg
agaacagggaagactgaatcaaggagagaagaggaaatgtacaaagtgcttgcaacaaac
tacgaggctcagatccaggagttggtcttggacaatgcggagctgatgagagttctgaac
caaatgaagagagagcttagagggtttctcagtccagacaaactctgccaagccaattct
cctccatcacttgaggaagaaactagtgtcaatgagtcccaggaagcaacaagggggcac
cttgcatactgtgttcaaaagcagtggaacaccttaaaggatcacatggcaaaactcgga
gtcgtggctatgcagacttctccagtggttgggaagaatgaccatgttgtcagtataact
gaccatgataaggaaatagccaacctgaagctggagcttgaacagagtaaggaaatcatc
tacgcacagcagcatcttctcgaggaccagttggccattcagaaagaagatctgacccga
ggatctgatttactggaggaagaggaatggttctacaaagaacggcaattgtttgaggag
cagagcaagaactttgaaatggagaggcagaggttcaccgaggcagcaattcgactgggt
caggagagaaaacagtttgaggaggaacgagcgctatacttgaaggaacagttcttgaac
ctgactccgtttcgggatcaaaggacaaaacccaagaggaaaccgcagacttcctttgtt
gtgaccagcccagaccaagaaaatctgtctccgcacttacccactcaaaagataagcatg
tccaggcgatgtcagcatgcttcaatgcacactccaagcccatcgttcaaatgtacaaag
cttcggcgacattctctgcctgcaggccatgagttgtatgaggttctcatagagacttgc
ttcagacctgccccaactgagcagcttaaaaaacctagcagcatgagagagagcccatcc
aaccagcgagactcagcaacccaaaccaggactggcctccgatggatcggcactggtttc
ttcctgaatgaacatgatgattctttgtgttgtggacacttgtgctcaccaatctaa
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