Rhincodon typus (whale shark): 109916017
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Entry
109916017 CDS
T06055
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109916017 (rnf165a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109916017 (rnf165a)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109916017 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_16
Prok-RING_4
zf-RING_Vps41
RINGv
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109916017
NCBI-ProteinID:
XP_020371302
LinkDB
All DBs
Position
1:26984923..27020357
Genome browser
AA seq
346 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVNNRGAPFPRSQQSHVTSCRQLHLSPQSEFPLSHSVQSQPGLSS
QLTPSHQHTTTAVPVHQPLTPLPSAQFQDVPTFLPQSLHQQYLLHQQLLEAQRRRLLPFP
RRTQERAPPYPHRLRAGFDFSNHLHPGSAVGTQPRYLTEGTDWDISVEAGLPHTQYQALH
VHRLHHYLATTRIHHFSRSMSSASVIIPDLRNYPYPHLHLLALQGLNGGRQSPAVRESYE
ELLQLEDRLGTVNRGAVQNVIERCTFPHKYKKRMQQNLKEPKEDEEETDFDEKCTICLCM
LEEGEDVRRLPCMHLFHRVCVDQWLATSKKCPICRVDIEAQLLPDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgctagtacatgtcggatatcttgttcttccagtttttggatctgtgaacaacaga
ggtgcccctttcccaaggtcacagcagtcacacgtcacatcctgcagacaacttcacctc
tctccacaatccgagttccccctgtctcactctgtccagtctcagccaggtctgagcagt
caactgactccatcacaccagcacaccacaactgcagtgccggtacaccagcctttgact
cctttaccaagcgcacagttccaggacgttccgaccttcttacctcagtcgttacaccag
caatatctcttacaccagcagctgcttgaggcccagcggcgaaggctgttgcctttcccc
agacggacacaggaaagggctcctccttacccccaccgtctccgagcaggttttgatttc
agtaaccacctccatcctggttcagcagtgggaacacagcccaggtacctgactgaaggc
actgactgggatatcagtgtagaggctggtttgccccatactcagtaccaggccctccat
gtacatcgtttacatcattacctagcaacaaccaggatacatcatttctctcgaagtatg
tcttcggcatctgtgattattcctgacttgaggaattacccttatccgcatcttcatcta
ctggctctccaagggttaaatgggggtcggcagagccctgccgttagggaaagttatgag
gaactgttacaactagaggacagacttggcactgtgaaccgtggagccgtgcagaatgtg
atcgagaggtgcaccttcccacacaaatacaagaagagaatgcaacagaacctcaaggag
ccaaaagaggatgaagaggaaacagactttgacgagaagtgtacaatttgtttatgtatg
ctggaggagggagaagatgtcaggaggctcccttgtatgcacctttttcaccgagtctgt
gttgaccaatggctggccaccagtaaaaagtgcccgatctgccgagtagacattgaagca
cagctcttaccagacagctga
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