Rhincodon typus (whale shark): 109916027
Help
Entry
109916027 CDS
T06055
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109916027
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109916027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109916027
04090 CD molecules [BR:
rtp04090
]
109916027
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109916027
CD molecules [BR:
rtp04090
]
Proteins
109916027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Sh_2
FliJ
Motif
Other DBs
NCBI-GeneID:
109916027
NCBI-ProteinID:
XP_020371311
LinkDB
All DBs
Position
6:complement(98315139..98338995)
Genome browser
AA seq
318 aa
AA seq
DB search
MQTGKTVQINHLLVIGLLHHYRLKVKFRVMLRMLQLREGLNAQVRCFVYCAFILTLAAVL
SAYIAAVSLHHVIVLKEEISSLRQELATYKFQLDHLETLTVTKGLSTNWSTSINQINELH
EKKLHRREKWQEEKIKLRGRRSLPEQEKQSFVQFIAVRDQRPLLKVNDCLKYMHERPQST
CRVERRSVSNENSKQETTIPWILSLKNGNALVKKDNNILIKEAGYFLVYSQVWYKDNSFT
MGHFIQRRKANSVGSEPRTVILFRCIQNMSACCPNDSCFTAGIANLEVGDELELIIPRIQ
AQIALKGDGTFFGAIKLL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaggaaaaacagtacaaattaaccatcttcttgtgattgggttattgcaccat
tataggttgaaagtgaaatttagagtaatgttgagaatgttgcaactacgagagggttta
aatgcacaagtcagatgttttgtttactgtgccttcatcctcactttggcagctgttctg
tcagcttacatagcagcagttagtctacatcatgttattgtgctgaaagaagaaatctca
tccttgagacaggaattggcaacgtacaagtttcaactagatcacttggaaacattaacg
gtgaccaagggcctgtcaaccaactggagcacttcaataaatcagattaatgagctccat
gagaaaaaactgcatcgaagggagaaatggcaagaagaaaaaataaaacttagaggaaga
agatcacttcctgaacaagagaagcagtcctttgtgcaattcattgctgtacgtgaccaa
agaccacttctaaaagtgaacgattgtctgaagtatatgcacgaaaggccacagtcaacc
tgtcgagttgagcgaagatctgtttccaatgaaaacagtaaacaggagacaaccatccca
tggattctaagtttgaaaaatggaaatgctcttgtgaaaaaggacaacaacatcttgatc
aaagaggctggctactttctggtgtacagtcaggtgtggtataaggataattcatttaca
atgggacattttatccagaggagaaaggccaatagtgttggcagtgaaccacgaactgtg
atcctatttcggtgtatccaaaatatgtctgcctgttgcccaaatgattcttgctttaca
gctggcattgcaaaccttgaagtgggggatgaactcgaactaataataccacgaattcaa
gcacaaattgcattaaagggagatgggactttttttggggcaataaaactgctttaa
DBGET
integrated database retrieval system
