Rhincodon typus (whale shark): 109916032
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Entry
109916032 CDS
T06055
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04217
Necroptosis
rtp04622
RIG-I-like receptor signaling pathway
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109916032 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109916032 (cylda)
04625 C-type lectin receptor signaling pathway
109916032 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109916032 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109916032 (cylda)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109916032 (cylda)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C67
109916032 (cylda)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109916032 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
109916032
NCBI-ProteinID:
XP_020371322
LinkDB
All DBs
Position
15:37848207..37896636
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AA seq
661 aa
AA seq
DB search
MLIMLIGSCANIADTSETRPLKQNFASKGINEKISSTVSSRSKNKGLVSQSGKSPGHNRN
RSELRCTLNGASIDPQKSKSTWYIDEGSEDTAKSLVDTHSKLSQSPPTTSSLQASLSNEN
KFHSLPFSLTKKPNVNGSIGHTLSLSVQSVMMDVNTSASQDAEPGGLSTIEQPNLEIGSL
VQVKENPPLYGVIRWIGQPLGVNEQIAGLELEEESVGCTDGTFKGIRYFMCASKKALFVK
LKSCRPDSRFVSLPHHSNQIERCNSIAFGGYRSEVVKENTPPKMEKEGLAIMVGKKKGIQ
GHCNSCYLDSTLFCMFAFSCVLDTVLLRPKEKDDVEFYTETQDLLRTEIVNPLRNHGYVC
ATKIMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILKVEPLLKIRSAGQKVQDCFFY
QIFMDKNENVGVPTIQQLLEWSFITSDLKFAEAPSCLIIQMPRFGKDFKLFNKIFPSLEL
DITDLLEDTPRDCRICGGLALYECKECYEDLDITAGKIKQFCKACTTQVHLHPKRQGHKQ
RKVTLPEQMADYAWRQCCVPRQKMKLFAVLCIETSHYVAFVKYGPDDSAWLFFDSMADRD
GGQNGYNIPQVTQCPEIGEYLKMSPEELHGLDPKSIQGFARRLLCDAYMCMYQSPTMSLY
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttattatgttaattggatcctgtgcaaatattgcagacacctcagaaacacggccg
ctgaaacaaaactttgcatcaaaaggtattaatgaaaaaatctcttcaactgtgagcagc
agatcaaagaataaaggactagtttcacaatcgggaaaatctccaggacataataggaac
cgatctgaattacgttgcacattaaatggtgcatccattgatccacaaaaatcaaaaagt
acatggtatattgatgaaggaagtgaagatacagcaaaatcactagtagacacacattcc
aagttgagtcagtcaccacccacaacgtcttctcttcaagcttccctttcaaatgaaaac
aaattccattcgttgcccttcagccttaccaagaaacccaatgtaaatggaagcataggt
cataccctttccttgtctgtccaatcagtaatgatggatgtgaataccagtgcaagtcaa
gatgctgaaccaggaggattatcaacaatcgagcagcccaatttggaaataggatcgttg
gtgcaagtaaaggaaaatcctcctctctatggagtaattcggtggattgggcaacctctt
ggggttaatgaacaaatagctggacttgagcttgaagaagaaagcgtaggctgtacagat
ggtactttcaagggaatacgttactttatgtgtgcatcgaagaaggctttatttgtaaaa
cttaaaagctgccggcctgattcgagatttgtgtcgttgcctcatcactccaatcaaatt
gaaagatgcaattccattgcatttggaggatatcgaagtgaagtggttaaagaaaataca
cctcccaagatggaaaaagaaggcctagctataatggttggaaagaaaaagggtattcaa
gggcattgcaattcctgttatttagattccactttgttctgtatgtttgcttttagctgt
gtgttggacacagtattgcttaggccaaaagaaaaagatgacgttgaattttatactgaa
acccaagatttgttacgaacagaaatagtcaatcctttgagaaaccatggatatgtatgt
gctactaaaataatgaaacttcgaagaattcttgaaaaggttgaggcagcttcaggattt
acttcagaagagaaagatccggaagaatttctcaacatattgtttcatcatatattaaaa
gtagaacctttattgaaaatcagatcagctgggcaaaaagtacaagattgtttcttttac
caaatattcatggataaaaatgaaaacgttggtgtcccaacaattcaacagttgctggaa
tggtcctttattactagtgaccttaagtttgctgaggcaccttcatgcctaataattcaa
atgcctcgatttggaaaagatttcaagttgttcaataagatatttccatctttggaattg
gatatcacagatttattagaagacacacccagagattgtcgtatctgtggaggtcttgca
ctttatgaatgcaaagaatgttatgaagatcttgatataactgctggaaaaatcaagcag
ttctgcaaagcttgtactacccaagtacatctccatcctaagaggcaaggacacaagcag
agaaaagtgactctaccagaacagatggctgactatgcctggaggcagtgttgtgtaccc
agacagaagatgaaattgtttgctgtgctctgcatagagactagtcactatgtggctttt
gtcaaatatggccctgatgactcagcctggttgttttttgacagcatggctgatcgggat
ggtgggcagaatggctacaacatccctcaggtgactcagtgtcctgagataggagaatat
ttaaaaatgtcaccagaggaactacatggattggatcccaaaagtatccaaggctttgca
cgaaggctgctgtgtgatgcatacatgtgtatgtaccagagcccgacaatgagtttgtac
aaatag
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