Rhincodon typus (whale shark): 109916041
Help
Entry
109916041 CDS
T06055
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b isoform X3
KO
K07206
tuberous sclerosis 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
rtp04150
mTOR signaling pathway
rtp04218
Cellular senescence
rtp04910
Insulin signaling pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109916041 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109916041 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
109916041 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
109916041 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109916041 (tsc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hamartin
Motif
Other DBs
NCBI-GeneID:
109916041
NCBI-ProteinID:
XP_020371331
LinkDB
All DBs
Position
28:complement(39784778..39824404)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTQPVNVSDLVPLLESTDLQVLEEVKGIVTDHLRSDRGPLLLNALVDHYLENNSVLAVQI
LSAVQEPHDKHLLDRLNECMGKAATRLSAVTLLGHVIRREPTWIHKLFRAPLLVSLLKCL
KTETEVVVLTSGLLVLVILLPMIPQAGKQYLLDFFEIFGRLAAWSLQKPGQLPEVYLIHL
HASVYALFHRLYGMYPCNFVSYLRSHYSMKENMETFEEVVKPMLEHVRIHPELVTGTKDH
ELDPIKWKRFETHDIVIECAKVSLDPKEASCEEGYTVMPKHFSTHTQHKHADHSCSPFSD
SQSSFGSASSTYTPRVPFSNLPGSQPRYKTPPTLQRLPADGIQDTLWSPSSACGLSTPPS
SRGLSPSPFESASCLHRVHSTPVGGKGSSTEAPTLSPPPPCPADELMHSSFSTALPRKDG
KLESGKPLIKQRHVTSDKGAADSPGGLENESIKTVSLKELPEVIKGLNLQPDGTEKENEE
AAIADELSEITPMDLQSLVTRGGFDSPFQHRTETLTGPQTKREQESYSSATEQGLCPEPQ
QAPSSTCKASDHHRREQCPIKQGFMPIEKPSENCSGSPVKQEMLKTGSTSSDAFTPGPLL
KVQALRHPPLGSGHPLPYEHLFDLALPKTASLFIKQKTSELQKVAAEHSEDPMSQSPAPI
SPLDVLDKLIQHGGDAHVKELSRVCPVQHEPQSQRKTVRLPLPSKSADWTHFGGSVPMDE
LQRLRNQLILLHNQLLYERYKREQHAVRNRRLLRKILKATALEEQNLAMKDQLKLQELDI
GSLKHSLFIEQNQYRLLREEKESIVKHLNSQIAELQKERGDYRASCQELQNKLQDCQKMI
GELKLELQKANNKACNTAYLLNQMTEKFTSTQSVQQQMEWLNKQLLLLSEVNELHMEKLL
HSQMGSAKAAEAEMLQISLVREREKMKHRIQQQNQRLEASQRRITELENQLTKKEHLFLE
QKKYLENVKNMASGELQAAESRYEAQKRITQTLQCEILELYSKLEQAGPPEKPAGAERTP
RPIEDMSENIGAISDSLAESPDTESTSHQAKPPVGPSTSTDRSPERKLQPALMVAEQGGR
GQRALSPNLLEQPTTPVTVGSYPSSKSLLGMRARELFRNKSESQCDNERPKMDSLFDSLK
TEYSVELGDSLGPMKLQVSSPESVRQLSIMDYDGTHHDQN
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagccagtaaatgttagcgacctggttccactgctggagtccacagacctgcag
gttctcgaggaagtcaaggggattgtcactgaccacctccgctcagaccgtggccccttg
ctgctgaatgctttggtggatcattatttggaaaacaattctgtgttagctgtacagatt
ctttcagcagtacaggagccccatgataagcatcttctggatcgactgaatgagtgcatg
ggaaaagcagccactcgactctctgccgtgaccttgctgggtcacgtcatccgacgtgag
ccaacatggattcataaactctttcgtgcacctttgctggtttcactactcaagtgtctg
aagacagagactgaagttgttgtcctcactagcggactccttgtgttagtcatcctcctg
cccatgatcccacaagctgggaagcaatatctcctcgatttctttgaaatctttggccga
ttggctgcttggagcctacaaaagccaggccaattgccagaagtgtatctgatccaccta
cacgccagtgtttatgcattatttcaccgtctctatggaatgtacccgtgcaattttgtg
tcctacctccgctcccactacagtatgaaggaaaacatggaaacgtttgaggaggtggta
aagccaatgctggaacatgtgcgaatccaccccgagctagtgactggaaccaaggaccat
gaactggaccccattaagtggaagcgatttgaaactcatgacattgtcatagaatgtgcc
aaagtttccctggacccaaaggaggcttcatgtgaggagggttacacggttatgcctaaa
catttctctacacatactcagcataagcacgctgaccacagctgtagtccattttcagat
tctcagagtagctttggtagtgcgtcatcaacgtacacgccccgggtccccttctccaat
ctcccagggtcccagcctcgttacaagacaccaccaaccttgcaacgcctccctgcagat
gggatccaggacacactgtggagtccatcttcagcgtgtggcctgtctacacctccatcc
tcaagaggactttctcccagcccatttgaaagtgcctcctgcctacacagagttcacagt
acaccggttggtggaaaaggatcatctactgaagcacccactctctcccctccccctcca
tgtcctgcagatgaactcatgcacagttcattttcaacagcactgccaagaaaggatggt
aaactggagagtggaaagccattaatcaaacagcggcatgtgactagtgataaaggagcc
gctgacagcccaggtggtttagagaatgagagtatcaaaactgtatctttaaaagagcta
ccggaggttataaaggggttgaatctacagccggatggaacagaaaaggagaatgaagaa
gctgctattgctgatgaactttctgaaattacacccatggatctccagtccctggttact
cgaggaggattcgactcgccatttcaacacaggactgaaacactcactggccctcaaacg
aaacgtgagcaggaatcttactcttcagccactgagcagggactgtgccctgagccccag
caagccccatcttcaacttgcaaagcgtcagaccatcacagacgagaacaatgtcctatc
aaacaggggttcatgcccattgagaagccaagtgagaattgctctggaagcccagtcaaa
caggagatgctcaaaacagggtcgacatcatcggatgcttttacacctggccctctgtta
aaagtccaggcactgaggcatcctccacttggtagtggtcatcccctcccgtacgaacac
ctcttcgatttggccttgcccaagaccgccagtctcttcatcaaacagaagacctctgag
ctgcaaaaggtagcagctgagcactcggaggacccaatgtcgcagtcacctgcaccaatc
tcgcccctcgatgtgctggataagctaattcagcatgggggagatgcacacgtgaaggag
cttagcagagtttgtcccgtgcagcatgagccccaaagtcaaagaaaaacggtcagattg
cctttgcccagcaaatctgcagattggactcactttggaggttctgtccccatggatgag
ctacaaaggcttaggaatcaactaattttattgcacaaccagctactatacgaacgctac
aagagagagcaacatgctgttcggaataggcgtctgctgcgtaaaattctcaaagcaact
gcactggaggaacaaaatttagctatgaaggaccagctgaaactccaggaattggacatt
ggatctctcaagcacagtttgttcattgagcagaaccagtatcggctgctgcgagaagag
aaggaatctattgtcaagcatctcaacagccagatcgctgagttacagaaggagcgaggt
gactatcgtgccagctgtcaggagttgcagaataaactacaggattgtcagaagatgatt
ggggaattgaagctggagctacagaaggccaataacaaagcctgtaacactgcatatctg
ctgaaccagatgactgagaagttcactagcacacagtctgtacagcagcaaatggaatgg
ttgaacaagcagctactgctcctaagtgaagtgaatgagctacatatggagaagttactg
cactctcagatgggctctgccaaggcagcagaggcggagatgctgcagatttctttagtc
cgagagagggagaagatgaagcaccgcattcagcagcaaaaccagagattggaggcatcg
cagcgccgcataacggagcttgaaaaccagctgacaaagaaagagcacctttttcttgag
caaaagaaatatctggaaaatgtcaaaaacatggccagtggagagctgcaggcagcagaa
agccgctatgaagcccagaaacggataacgcaaactctacaatgtgaaatcctggaactt
tacagcaagttggaacaggcaggacctccagagaagccagcgggagcagaaagaacacct
cggcctatagaggacatgtctgaaaacattggtgccatttctgactctcttgctgagagt
ccagatacagagagcactagtcaccaagcgaagccccctgtgggccccagcacctcgact
gaccggtctcccgaaagaaagctacagcctgccttgatggttgctgagcaaggggggcga
ggtcaaagagccctgagccccaacctcctggagcagcccaccacgccagtcacagtcggg
tcctaccccagctccaagagtctccttgggatgcgtgcccgcgagctgttcaggaacaag
agcgagagccagtgtgacaacgagcggcccaagatggacagcctctttgactccctcaaa
acagagtacagtgtggagctgggagactctctcggacccatgaaactgcaggtgtccagt
ccagaaagcgtcaggcagctcagcataatggactatgacggaacgcatcatgaccagaat
taa
DBGET
integrated database retrieval system
