Rhincodon typus (whale shark): 109916111
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Entry
109916111 CDS
T06055
Symbol
atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04136
Autophagy - other
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109916111 (atg3)
04136 Autophagy - other
109916111 (atg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109916111 (atg3)
04121 Ubiquitin system [BR:
rtp04121
]
109916111 (atg3)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109916111 (atg3)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109916111 (atg3)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
109916111 (atg3)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109916111 (atg3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
109916111
NCBI-ProteinID:
XP_048458541
LinkDB
All DBs
Position
11:complement(39050715..39090094)
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AA seq
315 aa
AA seq
DB search
MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVVAGDHLVHHCPTWQWGSGED
AKVKPYLPKDKQFLVTRNVPCYKRCKQMEYSDEFEAVIEEDDGDGGWVDTYHNSGVAGLT
ESVTEITLESKDNSKCVGSTTACVDDNDEDDDGDAADMEAYEESGLLEDTDDATLDTSKI
EASKPKADAVGEDGILQTRTYDLYITYDKYYQTPRLWLFGYDEQRHPLTVEEMYEDISQD
HVKKTVTIENHPHLPPPSMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQA
VIPTIEYDYTRHFTM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgtcattaacactgtcaaagggactgcacttggtgtggctgagttcctaacg
cccgtacttaaggaatcaaagtttaaagaaactggagtaattaccccagaggagtttgta
gtagctggagatcacctggtccatcactgtcccacttggcaatggggaagcggggaggat
gccaaagtgaaaccatacttacccaaggataagcagtttctggtgacaagaaatgttcct
tgctataagcgctgcaaacagatggagtattctgatgaatttgaagcagtcattgaagag
gatgatggtgatgggggctgggtggatacttaccacaattcaggtgttgctgggttgaca
gaatctgtaacagagattactttagaaagcaaagacaactcaaagtgtgtaggcagcacc
acagcctgtgtggatgataatgatgaagacgatgatggagatgctgctgatatggaagcc
tatgaagaaagtggattgttggaagatacagatgatgcaaccctggatactagcaagata
gaagcaagcaagcccaaagcagatgctgttggagaagatggaattcttcagacgagaacc
tacgatctatacattacttatgacaaatattatcagacaccaagactttggttgtttggt
tatgacgagcaacgacacccactgactgtagaagagatgtatgaagacattagccaggac
catgtcaagaaaacagtgacaattgaaaatcatcctcacttgcccccgccttcaatgtgt
tctgttcatccatgcagacatgctgaggtaatgaagaaaatcattgaaacagttgcagaa
ggtggaggtgaactcggtgtacacatgtatcttcttatttttttgaaatttgttcaagca
gtcattccaacaattgaatatgattacacaagacactttaccatgtaa
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integrated database retrieval system
