Rhincodon typus (whale shark): 109916137
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Entry
109916137 CDS
T06055
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
109916137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109916137
Ion channels [BR:
rtp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109916137
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
109916137
NCBI-ProteinID:
XP_048455732
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Position
1:complement(78780614..78816879)
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AA seq
584 aa
AA seq
DB search
MNNEGYNIVLNVSSGPILVFTASKRILYQLWANNINQEKEQEDKNKLPVLDPAGNVYYNW
LLIITMPVMYNWTMIIARACFEELQSDYLSMWFVLDYVSDVIYIIDMYLRTKTGYLEQGL
LVSDAKKLREKYFATIQFKLDVISLIPTDFLYFYLGLEYPEIRLNRLARISRMFEFFSRT
ETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAIGFGADTWVYPNVSIPEFSRLARK
YVYSLYWSTLTLTTIGETPPPVEDSEYFFVVADFLVGVLIFATIVGNVGSMISNMNAARA
EFQSRIDAIKQYMHFRKVSKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAIN
VHLDTLKKVRIFADCEAGLLIELVLKLRPQVYSPGDYICRKGDIGREMYIIKEGKLAVVA
DDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEY
PDAKAMLEEKGKQILMKDGLLDLDIAQLGADPKDMEEKVTRLDMAIDLLQTKFARLLAEY
NSTQQKLKERVTRVENKIKQSGMQLEYSELIDTEAPSETEESKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaaggttacaacattgtgcttaatgtatcttctggtcccattctcgtattc
actgctagtaaacgtattttgtatcagctgtgggctaataacattaatcaggagaaggag
caagaggataaaaacaagcttcccgttcttgacccagcaggaaacgtgtactacaactgg
ctcctgataattacaatgcctgtgatgtacaactggacaatgatcattgctagagcatgt
tttgaagaacttcaatctgattacttgagcatgtggttcgtccttgattatgtatctgat
gttatttatattattgacatgtatttaaggacaaaaacagggtatctggaacaaggtcta
ttggtcagtgatgcaaagaaactcagagaaaaatactttgccacaatccaattcaaatta
gatgtcatctcactcataccaactgactttctgtatttttaccttggactggaatatcca
gaaattagattaaatcgtttggcaagaattagtcgaatgtttgaattcttttcaaggact
gaaactcggacaaactacccaaacattttcaggatttccaaccttgtcatgtacattgtg
atcattattcattggaatgcttgtgtatatttttcaatttccaaagctatagggtttggg
gcagacacatgggtgtatccaaatgtatccattccagagttttcccggcttgctcggaag
tatgtgtatagtctctactggtcaacactgacattaacaaccattggtgaaacacctcct
ccagtagaggattcagaatacttctttgtggtggctgatttcctggttggtgtgttgatt
tttgccaccattgttggtaatgtcggctccatgatttccaacatgaatgcagctcgtgca
gagtttcaatcaaggattgatgccatcaagcagtacatgcacttccgaaaagtgagcaaa
gatctggagaagagagttatcaaatggtttgactacttatggacaaacaaaaaagctgtg
gatgaaagagaggtcttgaaatatcttcctgacaagctgagagcagaaattgccatcaat
gtccaccttgatacactgaagaaagttcgtatctttgcagattgtgaagctggtctactg
attgagttggtattgaagttaagaccccaggtgtacagcccaggggattatatctgtcgc
aaaggagatattggtagagagatgtatatcatcaaagaagggaaacttgctgttgttgct
gatgatggaattactcagtttgtggttctaagtgatggcagctattttggcgaaattagt
attctgaatatcaaaggtagtaaagctggaaacagaagaacagcaaacattaagagtata
ggctactcagatttgttctgcctctccaaagatgatctaatggaagctttaactgaatat
cctgatgcaaaagcaatgctggaagaaaagggaaagcaaattctaatgaaggatggtctt
ttggatctagatattgcccagcttggagctgacccaaaggacatggaagaaaaagtaaca
agacttgatatggcaattgatcttttacagactaaatttgctcgacttctggcggagtac
aactctacacaacaaaaactaaaagaaagagtgacaagagtcgagaacaaaattaaacaa
tcagggatgcaacttgaatattcagaactgatagatactgaagccccaagtgaaactgaa
gaaagtaaaaagtag
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