Rhincodon typus (whale shark): 109916169
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Entry
109916169 CDS
T06055
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109916169 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Other domain-containing proteins
Patched domain-containing proteins
109916169 (ptchd1)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
109916169
NCBI-ProteinID:
XP_048458586
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All DBs
Position
11:complement(72922141..72939995)
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AA seq
759 aa
AA seq
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MLGFNYSFAHMCILKDNKMCALDDIVYVLEELRAAWTINGTGIVINYPNTYLKDGQEVFI
GHQLGGVTLQNKNRVKSARAIQITYYLQTRNSLNDLVAEKWESAFCKTVENFQKSHKELK
LYPFTSSSLKEDFQKSSQVSEWYLVTSLLVVWLLAMLCCSMQDCVRSKPWLGLLGLVTMA
LATLTSAGIINLMGGKYNSTFLGIPFIILGHGLYGMFEMLSSWRETMEDQHVKERIANVY
ADTMLPITLTTAMYMVTFGIGASPFTNIEAVKEFCVNTCISVLFNYLYLMAFYGSNLVFT
GYLENNYQHSLFCRKVPKPDDLQAKPAWYRFIMMSKFNEEAASPNDPSPYESQFLLWFLK
QYYCDWITNTYVKPFVVLFYLVYISFALMGYLQISEGLDLSNVVATESRTVSYSTVQQRY
FSSYSPVIGFYIYEPIEYWNASVQEDLLEITGGFVRISWFETYLNYLKRLNVTSPVSRSY
FLETLRNSFLKTPQYSQFSDDIILVRKVNNELEVVASRMYLVAKTAENTREEIYDLLETL
RKLSLTYKVKFMIFNPSFIYMDRYASSVGAPLQNSCISALFVLFFSGFLVVNPLLNIWLS
LTVASVEFGVAGFMSLWDVELDCISVLCLIYGINYTIDNCAPFLSTFVLGKDLTRTKWVK
NALELHGVAILQSNFCYMVGIIPLSSVPSNLICTLFRCLFLIALFTFLHCFAILPVVLTF
VPPSKKQVERKSPENHSEVECMEMVDLDGTRVVDHITSV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcttcaactactcatttgcccacatgtgtattctaaaggataataagatgtgc
gccctggatgatattgtgtatgtgctggaggagctgagggctgcatggaccatcaatggc
acagggatcgtcatcaactacccaaatacctaccttaaagatggtcaggaggtgtttatc
gggcaccagctcggaggtgtcactctgcagaataagaatcgggtgaaatctgctcgagcg
attcaaatcacctattacctgcaaacacgtaactccttgaatgatttggtggcagagaaa
tgggaatcggctttctgcaaaaccgttgaaaatttccaaaaatctcacaaggagctgaaa
ctctatccgtttacatcgtcatcgctaaaggaggactttcagaagagcagccaggtttca
gagtggtatctggtgactagtttactggtggtttggctactggccatgctgtgctgttcc
atgcaagactgtgttcgtagcaagccctggcttggactccttggcttagtgacaatggca
ctggccaccctcacatcagcagggatcatcaacttgatgggagggaagtacaactctacc
tttctgggaataccctttattatattaggacatgggctctacggcatgtttgaaatgctc
tcatcgtggagggagaccatggaggatcagcatgtgaaggagaggattgccaatgtgtac
gctgacaccatgctgcccattacactcaccactgccatgtacatggtgacatttggcatt
ggcgccagtcccttcactaatatagaagcagtgaaggagttctgtgtgaacacatgcata
tccgtgctttttaactacctctacctgatggcattctatggctccaatctggtcttcact
ggttacttagaaaataattaccagcacagtctcttttgtagaaaagtgcccaagccagat
gatctgcaagcaaaacccgcctggtatcggtttatcatgatgtccaaattcaatgaggag
gcagccagcccaaacgacccaagcccctatgaaagtcagttcctgctttggtttctgaag
cagtactattgcgattggattacaaacacttatgtcaagccttttgtggttttgttttat
ctggtttatatctcctttgccttaatgggctacctgcagatcagtgaagggttggacctc
agcaacgtcgtagccactgagtctcgaactgtctcgtatagtaccgtccagcagagatat
ttcagtagctacagccccgtcatcggcttttatatttatgaacccatcgaatactggaat
gccagcgttcaggaggatttgttagaaatcactgggggctttgtcagaatttcttggttt
gaaacatacttaaattaccttaaaagattgaatgttacctctcccgtgtctcgtagctac
ttcctagagaccctgcggaattccttcctaaagacgccgcagtattcccaattctccgat
gatatcatactggtgaggaaggtcaacaatgagctggaggtggtggcctcacgcatgtat
ctcgtggccaagacagcggaaaacaccagggaagagatttatgatctgctggagacactg
aggaaactgtccctgacctacaaagtgaaattcatgatttttaacccatcgtttatttac
atggaccggtatgcttcgtcggtgggagcgcccctgcagaactcgtgcatcagtgccctc
tttgtcctcttcttctccggtttcttggtggtgaaccccctgctgaacatttggctcagt
ctgactgtggcctcagtggagtttggagtcgctggctttatgagcctgtgggatgtggaa
ctggactgtatctccgtcctctgcttaatttacgggataaactacaccatcgacaattgt
gcaccgttcctgtcgacatttgtcctgggtaaagacctgacaaggacgaagtgggttaaa
aatgctttagaactgcatggagtggccattttgcagagcaatttttgctacatggttggt
ataatccccctcagttcggtgccttcgaacctgatctgtacactattcaggtgtctgttt
cttatagcccttttcacctttctccactgctttgccattctgcccgtggtcctgaccttt
gttccgccttccaagaagcaggtggagaggaagagcccagaaaaccacagcgaggtcgag
tgcatggagatggtggacttggatggcacccgggtggtcgaccacatcacctcagtctga
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