Rhincodon typus (whale shark): 109916202
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Entry
109916202 CDS
T06055
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109916202
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109916202
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109916202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH_2
zf-RING_2
zf-C3HC4
zf_CCCH_4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-CCCH
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109916202
NCBI-ProteinID:
XP_048468220
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All DBs
Position
25:21183395..21203428
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AA seq
451 aa
AA seq
DB search
MAEAGAASGPRRRRILCRNFVCGVCKWGHSCYYSHDLSMLKSSQICKHYLSGFCFYGNSC
RYLHIQPAGWLSGNRRGSEPALQLKAGESSQRYRGMQSSDPTGRNCSRNRRSSAPAIPRI
PGRFFQHFHTAEHPVHSTTAKSTWGRRGSEPAVSSFTHFARDTRRSGTHLEEDVDEVKEN
ETPEGLDRWAFAAEFVPPQFQKHGCASTPQAAGPFNYMPGSVKSVSQTALTPESSTSQSV
PQGELTKDSAFEKSKDIICGICMEKVYEKTPARDRCFAILPDCNHAFCVTCIKKWRESKG
FTNNVIKACPECRVVASYFIPYKYWVVDEQKQKLIEKFKVEKRKIHCKFFLRSNGRCPFK
SECIYLHEFPEGYRPTQHRQRRRRDSSPLGIMWEDDCDDEDYYHALHLLGVLTLNDSFLE
NLAHFEYELFDSDLSDFNQDDSDSDDDDFAI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagccggggcggccagtggtccgcggcggaggcggatcttgtgcaggaacttt
gtctgtggcgtttgcaaatggggacatagctgctattattcacatgatctctctatgctg
aagtcgtcccagatctgcaaacactacttgagtggattttgcttctatggaaacagttgc
agatacctgcatatccaacctgctggatggttatccggaaacagacgtggttctgaacct
gctcttcagctgaaggctggagaatcatcccagaggtaccgtggtatgcaatctagtgat
cctactggcagaaactgctctagaaatagacgtagctctgctcctgctattcccagaatt
ccaggaagatttttccagcatttccatacagcagaacatcctgtccactcaaccacagca
aaaagtacttggggtcgacgtggttctgaacctgctgtctccagtttcactcactttgct
agggatactagacgttctggcacgcacctggaggaggatgtcgatgaagtgaaggagaat
gaaacacctgagggcttagacagatgggcatttgctgcagaatttgtacctccacaattt
caaaagcatggttgtgcatcaacaccacaggcagcaggtcctttcaattatatgcctggt
tctgtcaagagtgtatctcaaactgcgttgacaccagagtcttcaacttctcaatctgtt
ccacagggagagttgactaaggattcagcctttgaaaagagtaaagatataatttgtgga
atttgcatggaaaaagtctatgaaaaaacaccagccagagaccgttgctttgcaattctt
cctgactgcaaccatgctttctgtgtgacctgtatcaaaaaatggcgagagagcaagggg
tttaccaataatgtaataaaagcatgtcctgaatgtagagtagtggccagttacttcata
ccatacaagtactgggtggttgatgaacagaaacaaaaacttattgaaaaatttaaagtt
gaaaagcggaaaatacattgcaaattttttctacgaagtaatggcagatgtccttttaaa
tctgagtgcatttacttgcatgagtttcctgagggatatcgacctacccagcatcgacaa
aggaggcgaagggatagttctccattgggaattatgtgggaagatgactgtgatgatgaa
gactattaccatgcccttcacctccttggtgtgcttaccctcaatgattcatttttagag
aatttggcacactttgagtatgaactttttgattcagatctatccgattttaatcaggat
gattcagattctgatgacgatgactttgccatttag
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