Rhincodon typus (whale shark): 109916203
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Entry
109916203 CDS
T06055
Symbol
fance
Name
(RefSeq) Fanconi anemia group E protein
KO
K10892
fanconi anemia group E protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109916203 (fance)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109916203 (fance)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
109916203 (fance)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FA_FANCE
RhoGEF
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-GeneID:
109916203
NCBI-ProteinID:
XP_048468219
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Position
25:complement(21201263..21230594)
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AA seq
529 aa
AA seq
DB search
MRDYKELLEQFEKPFQTLLHTLTTGISGATTAFHVLQRIQPKQPLHWKTFTETLCQLEPL
LEGKEKNLCLKPLFYLLPAMVRRNLLSFLHLGNAVIPKDCLHYLIVQLRQNPHADLWTQK
LLDILEQDVEGGLRHLKSVSQSEQSQQQLKSLCEKLVGISEECSDSEKRLGWYFSQQKNE
SSEGTEDKLLLTQNPKKRKNSLEDAFPLDDGEQNATKKIKLAQDISCLEPCVGTEKQDIT
TTSGSLESVEVVCPQAQSQLDIVEVEQKSPSSTQRSLDLPEYVKASVSSLRDLFGAESDK
LETSEELSILNECDTSQLEKLCLLLQLSELPEHLLPLTCIKLISLSSDLSYSNAAVLARN
LFLTRILSLTEPASRFLMAAITSFCKKYARPSCTALIGPILQNPDIGGIQVELICRLAED
CLKPEHLTMIFGHILSITWSEDLLSVVHTLLERKVEITPELFEQFVQKLSQHAGNFSKSM
KYAKVVLAALTKYQNYVTSVHKNLLSCALDLHKTFLKKSMQAALKHIDT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagggactataaagagctgctggaacagtttgagaaaccattccaaaccctgcttcat
acactgaccacgggcatatcgggagctaccactgcttttcatgttctacagcgcatccaa
ccaaagcagcctctccattggaaaacgttcacagagacattgtgccagcttgaaccattg
ttggaagggaaggagaagaacctttgtctaaaaccattgttttatcttttaccggcgatg
gtcagaagaaatcttttgtcatttcttcacctggggaatgctgttatacctaaagactgt
ctgcattatctcattgtccagttgagacaaaacccacatgctgatctgtggacacagaaa
ttacttgatatcctggagcaggatgtagaaggtggactaagacatttgaagtctgtttca
caatcagagcaatctcagcagcaattaaaatctctctgtgaaaaattagtggggatttct
gaggagtgctcagattctgagaaaaggttagggtggtacttcagtcaacagaaaaatgaa
tcctctgaaggtacagaagacaagctgctgttaacacagaaccccaaaaaacggaaaaac
tccttagaagatgcgtttcccttggatgatggtgagcaaaatgcaacgaagaaaatcaag
ttggcgcaggacatttcctgtttggagccctgtgttggcactgagaagcaggatatcacc
acaacgtctgggagtttggaaagtgtggaagttgtctgtccacaggcgcaaagccagttg
gacatcgttgaggtggaacagaaatcaccttcaagcacacagaggagccttgatctgcca
gaatatgttaaggcttctgtatccagcctgagggatctgtttggggctgaatcagataag
ttggaaacatctgaagaactaagcatcctgaatgaatgtgacacaagccagctggagaaa
ctctgtttattactgcaactgtctgaactcccagagcacctcctgcctttgacgtgcatt
aaactgatttccttgtcatctgatctcagttacagtaatgcggctgtgctggctcggaac
ctcttcttgacaaggatactttcactgacagagcctgcctcacgctttctaatggctgcc
atcacttcattttgcaagaagtatgcacgtccatcctgcacagctctgattgggccaatc
cttcagaatccggacataggaggtattcaagtggaactgatttgcagacttgcagaagac
tgcctcaaaccagagcatctaacaatgatttttgggcacatcttgtccattacatggagt
gaagacttactttctgtggtacatacactgcttgagaggaaggttgaaataacgcctgaa
ttatttgagcaatttgttcaaaagttaagtcagcatgcaggaaatttcagcaaatcaatg
aagtatgccaaagtggtgctggctgcacttacaaagtaccagaactatgtaacatctgta
cacaagaacttgctgtcctgtgccctagatttacacaaaacatttctgaagaagtcaatg
caggcagcactgaagcacattgatacatga
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