KEGG   Rhincodon typus (whale shark): 109916242
Entry
109916242         CDS       T06055                                 
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2
  KO
K15200  general transcription factor 3C polypeptide 2
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtp03021]
    109916242 (gtf3c2)
Transcription machinery [BR:rtp03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     109916242 (gtf3c2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd RBR Beta-prop_TEP1_2nd DSE1_N DUF2080 Beta-prop_VPS8 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 109916242
NCBI-ProteinID: XP_048453025
LinkDB
Position
5:complement(72798066..72887044)
AA seq 1218 aa
MEPNLQDTCEADSEEAQKTAVSVEAAQTPARSTTHINNDGLGSTTSDFHTENPAENYARL
GKEAICVSGFIEKDCDGLISDTNKNTSFISAASVRVSKPHVAIKTSGRAATNNRSPQKDK
SLLVSDLKLTSNLFTTDGIASTVSAGENHRPFGTTLLQQSADVNKEKPKSANHSSQLAEC
HPTLSKSAVICATITSKDTNLHPNTLVVSEQSTREIEGQWRKGGKDLLIDHLNHSAANEN
VATVNESEIKFCLAPDPLLIQQNTDKKQESCIKDQNSLMCNPEVDLCDRSVNGCPRETSA
NPVNIPKKRGRKPRSAVVTFAKEIPSHGNSENGCGPEVGTLEPVLIPKKQARKPKNTRTV
SQTSKRYSDAAENDGKFELGAPQPANIPKKRGRKPKNAKIMSVERVVQQIPSKGISDDAK
NDSNNEMVIHEPVKILTKRGRRPKNAKAVAAERVVLQAPTAGSNISENGGVTEIDAPPPM
QIPKKKGRKPKNKMVPQEESTDTHGLLKPIVQRLLEESNANNELTASGRPKRRAARAALL
YLHEIVEEIKSPSYKVDDVAGNISDCEPDQPLDQSLSQPPSSPKRRKGRKRQKISDVFDD
LSDDKDFVISDEGTDEEEDEEFNEVEPCSDGSESDLCDFRDGDGQKQRRSPINKQSCSTK
RRLFGNFANGLPNTIMVPVWEATTITRKHREEHHSPWVFPHWMPSVQDWSFLSQSESLRY
LPNEGISPMFKIKREGLRENSVIQRLRRFQSLPAHKDRWDVNFFVGGPVWCVEWCPTPEG
SAACQYAAIYCNKRMDDRHKLMDQYTEPTLLQIWQLGDLQQEQCPQMNAALAYGIATEYG
CIWDMKWCPSGAWELPETTRKIPQMARLGMLAAAFSSGKVVVYSLPHPESLNTYKMKCSK
GSSIPGPIICKVQCTVILEIGSVQFSGSSQCGQCFCLDWMPTGEHEYLAAGFYDGTVALW
NLNTTSLLLRVQQGDGTLRVFPFHSFVAHDHAVKAIAWSKAHSNFLVTASPDRKIKFWDL
RRTYQPINEIKRYLNTEVAWLLPWCGVMVAQENCYAAFGLSGIHYVDAGFLGFKPYFAAP
RAGTVWSISGSDWLNTCVSGDNTGEVIAVILPDCMNNTMNIKRPNERRFPVYKADLIHHN
AGSNISVSCLHQKEKEANVEKHSSEMEEEDSTSSPVIEPKTYNDTVKKYYLMFDDTDLVS
KSKSVSYLIQYCAERHLH
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggaaccaaatcttcaggatacctgtgaggctgattcagaagaagcacaaaaaacggct
gtctctgtcgaagctgctcagacccctgcaagatcaacgacccacataaataacgatgga
ttaggatctacaaccagtgattttcacactgagaaccctgctgagaactatgcgcgtttg
ggaaaagaagccatttgtgtgtccggcttcattgaaaaagactgtgatggtttaatcagc
gatactaacaagaatacttcatttatatctgcagcatctgtacgagtttctaaaccacac
gttgctattaaaacatcagggcgagcagcaactaataacagaagtccacaaaaagacaaa
agtctgcttgtttctgacctaaaattaacaagtaatctttttactacagatgggatagct
tctacagtgtctgcaggtgaaaaccatcgaccatttggtacaacccttttacagcaaagt
gctgatgttaacaaggagaaacccaaatctgcaaatcacagttcacaacttgcagagtgt
catcccactctgagtaagagtgctgtcatatgtgccacaatcacttcaaaagataccaat
ctccatcccaacactctggtagtttcagagcagagtactcgtgagatagaaggccagtgg
aggaaaggaggaaaagacctgctgattgatcacttaaaccattctgctgcaaatgagaat
gttgcaactgtaaatgagtccgaaattaagttttgtctagctcctgatccattacttata
cagcaaaatacagacaaaaaacaagagtcatgcataaaagaccaaaatagcttgatgtgt
aatccagaagtggacctctgtgatagatctgtgaatggttgccctcgtgaaacaagcgct
aatcctgtgaacatccctaagaaacgaggaagaaagcctagaagtgcagtggttacattt
gcaaaagaaattcccagtcatggcaacagtgaaaatggttgtggcccagaagtgggaact
cttgagccagtgctgattccaaagaaacaagcaagaaaacctaaaaatacaagaacagtg
tcgcaaacatcaaaacggtattctgatgctgctgagaatgatggcaaatttgaattggga
gctcctcaaccagccaacatcccaaagaaaaggggaagaaaacctaagaatgcaaaaata
atgtctgttgaaagagtagtgcagcaaattccatcaaaggggattagtgatgatgctaaa
aatgatagtaacaatgagatggtaattcatgaaccagtgaagatcctgacaaaacgagga
agaagacctaagaatgcaaaagcagtggctgctgaaagagtggtgctgcaggctccaaca
gctggtagtaatatttctgaaaatggtggtgtcactgagattgatgctccaccaccgatg
cagatacccaagaagaaaggaagaaaacctaaaaataagatggtaccccaagaagagagt
acagatacccatgggctgttgaagccaatcgtccagagattattggaagagagcaatgcc
aacaatgagctaacggcaagtggccgaccaaagaggagggcggccagagctgctttgctt
tacctacatgaaatagtagaggaaataaaatcaccgtcttataaggtggatgatgtggct
ggcaatataagtgattgtgaaccagatcaacctctggatcaatcactatctcaacctccg
tcttccccaaaacgaagaaaaggaaggaagaggcagaagatcagtgatgtttttgatgac
ttgtcagatgacaaagattttgtgatctctgatgaaggaactgacgaggaagaggacgaa
gaatttaatgaagtcgaaccatgcagtgatggttctgagtctgatctatgtgattttcgt
gatggagatggtcagaaacaaagaaggagtccgataaataaacaatcttgcagtacaaaa
cgtcggctgtttggaaattttgctaatggcctccctaatactataatggtaccagtgtgg
gaagctacaacaattacaagaaagcatcgagaggaacatcactccccatgggtgtttcca
cattggatgccttcagtgcaggactggagttttctttcacaaagtgaatcacttaggtat
ttgcccaatgaaggaatctcaccaatgtttaaaattaaaagggaaggtcttcgagaaaac
tctgtaattcagagactgagaagattccagtcactacctgctcataaagatcgctgggat
gtaaacttctttgtaggtggtcctgtatggtgtgtggagtggtgcccgacccccgagggt
tcagctgcttgccagtacgcagctatttattgcaataaaagaatggatgataggcataaa
ctgatggatcagtatacagagccaacattacttcagatttggcaactgggagacctccaa
caggagcaatgccctcaaatgaatgctgctttagcttatggtattgccacagagtacggt
tgcatctgggatatgaagtggtgtcccagtggtgcatgggaactgccggaaaccactaga
aagattcctcagatggcaagacttggtatgctagcagctgcattttccagtggaaaggtt
gtcgtttacagtttgccgcaccccgagtctctaaatacgtataaaatgaagtgttcaaaa
ggttcatctattccagggccaatcatatgtaaggttcaatgtactgtaattctggagatt
ggatcagtccagtttagtggttcctcacaatgtggacaatgtttctgccttgactggatg
cctactggtgaacatgaatatttggcagcaggtttttatgacggtacggttgctctttgg
aatctgaatactacatcattattgttacgagttcagcaaggagatggaactttgagggtc
tttcctttccactcctttgttgcacacgaccatgctgtcaaagccattgcttggagtaaa
gctcacagcaattttctagtaacagctagccctgacaggaagatcaagttctgggatctc
agaagaacatatcaaccaatcaatgaaattaagcgttatttgaacacagaggttgcctgg
ttgcttccatggtgtggagttatggtagcacaggaaaattgctacgctgcgtttggactc
agtggaattcactacgtagatgctggttttcttggatttaagccatattttgctgcacca
agagcaggaacagtgtggagtatttctggctctgattggttgaatacctgcgtctcggga
gataacacaggagaggtgattgctgtaatcctcccagattgtatgaacaacaccatgaat
atcaagcgacctaatgagcggcgttttcctgtttataaagctgacctcattcatcacaat
gctggcagtaacatttcagtctcctgcttacatcaaaaagagaaagaggccaatgtcgaa
aagcattcttctgaaatggaggaggaagattcaacttccagtcctgtcattgaaccaaag
acttataatgatacagtgaagaaatactacctaatgtttgacgatactgacttggtgagc
aaaagtaaatctgtatcatacttaattcagtattgtgctgagaggcatttgcattag

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