Rhincodon typus (whale shark): 109916282
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Entry
109916282 CDS
T06055
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03030
DNA replication
rtp03420
Nucleotide excision repair
rtp03430
Mismatch repair
rtp03440
Homologous recombination
rtp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109916282 (rpa3)
03420 Nucleotide excision repair
109916282 (rpa3)
03430 Mismatch repair
109916282 (rpa3)
03440 Homologous recombination
109916282 (rpa3)
03460 Fanconi anemia pathway
109916282 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtp03032
]
109916282 (rpa3)
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109916282 (rpa3)
DNA replication proteins [BR:
rtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109916282 (rpa3)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109916282 (rpa3)
MMR (mismatch excision repair)
109916282 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
109916282 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
DUF5818
DUF7223
Motif
Other DBs
NCBI-GeneID:
109916282
NCBI-ProteinID:
XP_020371593
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All DBs
Position
2:complement(73537647..73556986)
Genome browser
AA seq
121 aa
AA seq
DB search
MADDLEGPRTRINTSLVSRFTGRAVCFVGRVQKVHPSGTSFVLSDGDGKNVTVEMTDPLD
EELSGVIEVVGKITPKATIQAAYYAPFREDKNSFDLHLYNEALNIIHEFPQYYPFGVTGS
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatctggagggtccacgcacgaggattaacacgagcctggtctcgcggttc
accgggagggccgtttgtttcgtgggcagagttcagaaggttcatccctctgggacctcc
tttgttctgtcagatggtgatgggaagaatgtaacagtggaaatgactgatccacttgat
gaggagttgagtggagtcattgaagtggttggaaaaatcacaccaaaagccaccatccag
gctgcatattacgctcctttccgagaggacaaaaacagttttgatctccacctttacaat
gaagccctgaatatcatacatgagtttccacagtactatccatttggtgttacaggaagt
ggttga
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