Rhincodon typus (whale shark): 109916300
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Entry
109916300 CDS
T06055
Symbol
cul1b
Name
(RefSeq) cullin-1b
KO
K03347
cullin 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04110
Cell cycle
rtp04114
Oocyte meiosis
rtp04120
Ubiquitin mediated proteolysis
rtp04141
Protein processing in endoplasmic reticulum
rtp04310
Wnt signaling pathway
rtp04340
Hedgehog signaling pathway
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109916300 (cul1b)
04120 Ubiquitin mediated proteolysis
109916300 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109916300 (cul1b)
04340 Hedgehog signaling pathway
109916300 (cul1b)
04350 TGF-beta signaling pathway
109916300 (cul1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109916300 (cul1b)
04114 Oocyte meiosis
109916300 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109916300 (cul1b)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
109916300 (cul1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
CUL8_C
Motif
Other DBs
NCBI-GeneID:
109916300
NCBI-ProteinID:
XP_048464071
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All DBs
Position
2:complement(58702284..58761983)
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AA seq
626 aa
AA seq
DB search
MCDHQQGKAAVAMEEAKKQTQFLKVSYQVTNAVLKLIEKERNGETINTRLISGVVQSYVE
LGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLE
EQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQ
DGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTILDVHKKYNALVMSAFNNDAG
FVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVM
VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD
IGVSKDLNEQFKKHLSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFY
ASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQ
IKMDILVQVLQILLKSKLLVLEDESANVDEIEMKPDTLIKLYLGYKNKKLRVNINVPMKT
EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIK
KCIDILIEKEYLERVDGEKDTYSYLA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatcaccaacagggaaaggcagcagtagctatggaagaagcaaagaagcaaact
cagtttttgaaagtttcctatcaggtgacaaatgcagtcttgaagctgattgaaaaggag
agaaatggtgaaactatcaacaccagactgatcagcggtgtggttcagtcgtacgtggaa
cttgggctgaatgaagatgatgcttttgcaaaaggacccacgttaacggtgtataaagaa
tcgtttgagtcacagtttttggctgacacagagaggttttatacaagggaaagcactgaa
tttttgcagcaaaatcctgtaacagagtatatgaaaaaggcagaggctcggcttctggaa
gaacagcgtcgtgtacaagtctatcttcatgaaagcacacaggatgagctggctcgtaaa
tgtgaacaagtgcttattgaaaaacatctagagatttttcatacagagttccagaactta
ttagacgctgataaaaatgaagatcttggtagaatgtataacctagtttctcgaatccag
gatggccttggggagctgaagaagcttctagaaacacacattcataaccagggtttggct
gccattgagaagtgcggagaagctgctctaaatgatcccaaaatgtatgtacagactatt
cttgatgttcataagaagtataatgcattagtgatgtcagctttcaacaatgatgctggt
tttgtggctgctttggataaggcatgtggccgcttcataaataataatgctgtgacaaaa
atggctcagtcatcaagtaaatctccagaactattggcgcgatattgtgactcacttttg
aaaaaaagctccaagaatccagaagaagctgaacttgaggatacgcttaatcaagtgatg
gtggtgtttaagtatattgaagacaaagatgtattccagaagttctatgccaagatgtta
gcaaagagacttgttcatcagaacagtgctagcgatgatgcagaagccagtatgatctcc
aaactaaagcaagcctgtggctttgagtatacctctaaactccagcgaatgttccaggat
attggtgtgagcaaagacctgaatgaacaattcaaaaaacatctgtctaattctgagcca
cttgacttggatttcagtattcaggttttgagctccggttcttggcccttccagcagtca
tgcacatttgcactcccatctgagttggaacgcagttatcagagattcacagcattctat
gccagtcgacacagtgggcgtaaattgacgtggctgtatcagttgtccaaaggagagcta
gttacaaactgctttaagaacagatatactttacaggcatccacattccagatggcaatc
ctacttcagtataacacagaggatgcctacactgttcagcaattaacagacagcactcaa
atcaaaatggacatattggtacaagttttacagatattgctgaagtccaaactgctggtt
ttggaggatgaaagtgcaaatgtggatgaaatagagatgaaacctgacacattaatcaaa
ctgtacctggggtacaaaaataaaaagctgagagtgaacattaatgtgccaatgaagact
gaacagaaacaagagcaagagaccacacacaaaaacatagaagaagataggaagttgttg
attcaggccgcaattgtgcgaataatgaagatgagaaaagttctgaaacatcagcaatta
ctggcagaggtactgaaccaattgtcctccaggttcaaacccagggtcccagtcattaag
aaatgcatcgacatactgatagaaaaggagtatttggagcgtgtggatggggaaaaggac
acatacagttatttggcttaa
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