KEGG   Rhincodon typus (whale shark): 109916300
Entry
109916300         CDS       T06055                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04110  Cell cycle
rtp04114  Oocyte meiosis
rtp04120  Ubiquitin mediated proteolysis
rtp04141  Protein processing in endoplasmic reticulum
rtp04310  Wnt signaling pathway
rtp04340  Hedgehog signaling pathway
rtp04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109916300 (cul1b)
   04120 Ubiquitin mediated proteolysis
    109916300 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109916300 (cul1b)
   04340 Hedgehog signaling pathway
    109916300 (cul1b)
   04350 TGF-beta signaling pathway
    109916300 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109916300 (cul1b)
   04114 Oocyte meiosis
    109916300 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtp04121]
    109916300 (cul1b)
Ubiquitin system [BR:rtp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     109916300 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 CUL8_C
Other DBs
NCBI-GeneID: 109916300
NCBI-ProteinID: XP_048464071
LinkDB
Position
2:complement(58702284..58761983)
AA seq 626 aa
MCDHQQGKAAVAMEEAKKQTQFLKVSYQVTNAVLKLIEKERNGETINTRLISGVVQSYVE
LGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLE
EQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQ
DGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTILDVHKKYNALVMSAFNNDAG
FVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVM
VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD
IGVSKDLNEQFKKHLSNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFY
ASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQ
IKMDILVQVLQILLKSKLLVLEDESANVDEIEMKPDTLIKLYLGYKNKKLRVNINVPMKT
EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIK
KCIDILIEKEYLERVDGEKDTYSYLA
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgtgtgatcaccaacagggaaaggcagcagtagctatggaagaagcaaagaagcaaact
cagtttttgaaagtttcctatcaggtgacaaatgcagtcttgaagctgattgaaaaggag
agaaatggtgaaactatcaacaccagactgatcagcggtgtggttcagtcgtacgtggaa
cttgggctgaatgaagatgatgcttttgcaaaaggacccacgttaacggtgtataaagaa
tcgtttgagtcacagtttttggctgacacagagaggttttatacaagggaaagcactgaa
tttttgcagcaaaatcctgtaacagagtatatgaaaaaggcagaggctcggcttctggaa
gaacagcgtcgtgtacaagtctatcttcatgaaagcacacaggatgagctggctcgtaaa
tgtgaacaagtgcttattgaaaaacatctagagatttttcatacagagttccagaactta
ttagacgctgataaaaatgaagatcttggtagaatgtataacctagtttctcgaatccag
gatggccttggggagctgaagaagcttctagaaacacacattcataaccagggtttggct
gccattgagaagtgcggagaagctgctctaaatgatcccaaaatgtatgtacagactatt
cttgatgttcataagaagtataatgcattagtgatgtcagctttcaacaatgatgctggt
tttgtggctgctttggataaggcatgtggccgcttcataaataataatgctgtgacaaaa
atggctcagtcatcaagtaaatctccagaactattggcgcgatattgtgactcacttttg
aaaaaaagctccaagaatccagaagaagctgaacttgaggatacgcttaatcaagtgatg
gtggtgtttaagtatattgaagacaaagatgtattccagaagttctatgccaagatgtta
gcaaagagacttgttcatcagaacagtgctagcgatgatgcagaagccagtatgatctcc
aaactaaagcaagcctgtggctttgagtatacctctaaactccagcgaatgttccaggat
attggtgtgagcaaagacctgaatgaacaattcaaaaaacatctgtctaattctgagcca
cttgacttggatttcagtattcaggttttgagctccggttcttggcccttccagcagtca
tgcacatttgcactcccatctgagttggaacgcagttatcagagattcacagcattctat
gccagtcgacacagtgggcgtaaattgacgtggctgtatcagttgtccaaaggagagcta
gttacaaactgctttaagaacagatatactttacaggcatccacattccagatggcaatc
ctacttcagtataacacagaggatgcctacactgttcagcaattaacagacagcactcaa
atcaaaatggacatattggtacaagttttacagatattgctgaagtccaaactgctggtt
ttggaggatgaaagtgcaaatgtggatgaaatagagatgaaacctgacacattaatcaaa
ctgtacctggggtacaaaaataaaaagctgagagtgaacattaatgtgccaatgaagact
gaacagaaacaagagcaagagaccacacacaaaaacatagaagaagataggaagttgttg
attcaggccgcaattgtgcgaataatgaagatgagaaaagttctgaaacatcagcaatta
ctggcagaggtactgaaccaattgtcctccaggttcaaacccagggtcccagtcattaag
aaatgcatcgacatactgatagaaaaggagtatttggagcgtgtggatggggaaaaggac
acatacagttatttggcttaa

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