Rhincodon typus (whale shark): 109916311
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Entry
109916311 CDS
T06055
Name
(RefSeq) neuronal PAS domain-containing protein 2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109916311
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109916311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_NPAS4
PAS_4
Diguanyl_cycl_sensor
LYRIC
PAS_8
Motif
Other DBs
NCBI-GeneID:
109916311
NCBI-ProteinID:
XP_048453941
LinkDB
All DBs
Position
6:complement(50432565..50564264)
Genome browser
AA seq
785 aa
AA seq
DB search
MDEDDKDKAKRASRNKSEKKRRDQFNVLIKELSVMLPGSMRKLDKSTVLQKTIDFLQKHN
ETSAQKETSIIQHNWKPSFLSNEEFTQLMLEALDGFIIAVTTDGNIIYVSDSIAPLLGHL
PSDVIDQNLLNFLPEQEHEEIFKLLSSHTLVTDAVLPDYLNSENCFEFSCHLLRGTLDPK
ESPTYEYLRFVGNFQSYNSVPSSSCNGFEGSVQRMLQTTVDEQMCFVATVRLAAPQFIKE
MCIIEEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLEQLARCH
QQCTYHLVMQFGKGKSCCYRFLTKGQQWIWLQTRYYITYHQWNSKPEFIVCTHTLVSYAE
VRAQRRKDISLDDSSAEVVGSSLLKGHNLRIDTQQHVEVLPGSPSPSSSSRSSHKSSHTS
VSESASTQSKLLSETSGPSLQTKATVQQDVGIQQHPPTSSQSSLMSEPSIDLLSQELMPQ
ATVVSQPASMAQFPAQFDVIQSLKDQLEQRTRILQANITWQQEELQKIQEQLCMVDDSNV
QLLLQQPASISLSPLQFQESQQQKQQQVGLISQDRDLPSKQFQNAKMIHAGRVVQTSLPN
LSSASLALHFSSPVMFSQAPTMAIQSDGTIGHSGPNFGHDRQLRMLLSQPIQPLMPITCH
NRQPTEFTTTGQQAKYSQGQQLPQNPAPQPVRNSVSMISNPVLMGQIVTPAFSIPQSPLS
QQTMHLQQQPQHYLQQAQTSSSLQGEQPELLLLPPPYPQQQEILGYHPQPQQRQRVQRLS
ESSNV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgacaaggacaaggcaaagagggcttcacgtaacaagtctgagaaaaag
agacgtgatcagttcaatgtcctcatcaaagaactcagtgtcatgcttccgggtagtatg
cgtaaactggacaagtctacagtgttgcagaagacaattgactttttacaaaaacacaat
gaaacttcagcgcagaaggagacaagtatcattcaacataactggaaaccttcatttttg
agcaatgaagaatttacacaattgatgttagaggcattagatggcttcatcatagctgta
acaacagatggaaatatcatttatgtttctgatagcattgcacctctccttggacattta
ccttctgatgttatcgatcagaatttattaaacttcctccctgaacaggagcatgaagaa
atatttaaactgctgtcctctcacacattagtcacagatgctgttttgccagactattta
aactctgagaactgctttgaattttcttgtcacttgctgcgagggacattggatccgaag
gaatctcctacctatgaatatctacgatttgtgggaaatttccagtcatataacagtgtg
cctagctcgtcgtgtaacggttttgaaggttctgttcaaaggatgcttcaaacaacagta
gatgaacagatgtgttttgtagcaaccgttcgtctagcagcacctcagttcataaaggag
atgtgcataatagaggagcctttagaagaatttacctctcgacatagcttggagtggaag
tttttatttctagatcacagggctccaccgatcattggttatttgccttttgaagtcctt
ggtacatcaggttatgattattaccatgtggatgatctggagcagctagccaggtgccat
caacaatgtacgtaccatttggtgatgcaatttggtaaagggaagtcttgctgttatcgg
tttcttactaaaggacaacagtggatctggctgcagacccgctactacattacctaccat
caatggaactccaagccagagtttattgtgtgcacacacacattagtgagctatgcagaa
gttcgagcacagcgtcgaaaagacatcagtttggatgatagctctgcagaagttgttggt
tcttcgttgcttaagggacacaacttaagaattgatacgcagcaacacgttgaggtgctc
cctggcagtccatcaccttcttcttcatctcggagttcacacaaatcatctcatacctcg
gtgtcagaatctgcatcaacacaaagcaaactactgtcagagaccagtggtccatccttg
cagacaaaagcaacagtacaacaagatgtaggaattcagcagcatccacccaccagcagc
cagtcttctttaatgtcggagccatctattgatctactgtcacaggagttgatgccccag
gctactgtggtcagtcagcctgcatcgatggcacagttcccagcacagtttgacgtgatt
cagtctctcaaggatcagcttgaacaacgtacccgcattctccaagcaaatatcacatgg
cagcaagaagaactacaaaaaattcaggagcaactgtgcatggtggatgactcaaatgta
cagttactgttgcagcagccagcatctatcagcctgagtccattacagtttcaagaatca
cagcagcaaaagcagcaacaagtgggtcttatatcgcaagaccgggatctccccagtaaa
cagttccagaatgctaagatgatacatgctggacgtgtggtacagacctccctgcccaat
ttgtcctctgcgagcctggcattacatttcagcagtcctgtgatgttctctcaggccccg
acaatggcaatccaaagtgatggcaccattggtcattcaggtcctaacttcggtcatgac
aggcaactaaggatgttgcttagtcaacccattcaaccactgatgcctattacgtgccac
aacagacaacccacagaattcactactactggacaacaagctaagtactcacaaggacaa
caactgccccaaaatccggcaccacagccagttagaaatagtgtatcaatgatctccaat
ccagtgcttatgggtcaaatagtaactccggcattttctataccacagtcacctctgtca
cagcaaactatgcacctacaacagcagccgcaacactatttacagcaggctcaaacatcc
agttccttgcaaggtgaacaaccagagctgcttcttctccctcctccttatccgcagcaa
caggaaattctgggctaccacccacaacctcagcaaagacaacgtgtacagcgcctctct
gaatcatcaaatgtttaa
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integrated database retrieval system
