Rhincodon typus (whale shark): 109916359
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Entry
109916359 CDS
T06055
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109916359
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109916359
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
109916359
NCBI-ProteinID:
XP_020371662
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Position
24:complement(34104920..34175820)
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AA seq
619 aa
AA seq
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MGHGAQHTDERAMGTAAEEVRLEPDKGKEAQSKEFSSSLPTRQRGSETWSRQLEFTLVCV
GYAVGLGNVWRFPYLCYKSGGGAFLIPYLVMLLLCGIPLLLMEFTVGQFTHLGPVHALAK
FCPLLKGVGAATVVISFLLCTYYNVIITWALYYLFNSFGSSLPWQSCNNTWNIVENCTNG
FPGNATHLRSASQQFFDYRLLQMSRGIEEIGSIRWELFGLLLLAWIIVYFCIFKGVKSTG
KVVYFTAIFPYLILIILLINNVQLPGAKAGILFFLTPIWNKLLEVQVWVNAAAQIFNSIG
IGFGTMISMASYNKFNNNVLKDTLIVAVTNSATSIFAGFVVFSAIGYMSHQYNLPVEDIA
TDGPGLVYVVYPEAFVTMPLAPMWASLFFFMLLCLGVDSQFAMVEVMVTSLMDAWGKNLL
YFFKRKEIVVLLICFIAFILGIPNITQGGIYVFQLMDHYTAVVSLMFLAFFEVVAICWFY
GVRRLSANYKEMLGAPPNLFFKLCWWVASPLLVTVILVSSIIRYSPARYGKAYTYPPWAE
GIGWIVSVCSIIWIPIGAAHTLYTSKGSFIQRLHSSVSPVADVIPTENWEQMVKLTSGIY
SPSCSAMHDSNDLTEETGI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggggcatggagctcaacataccgatgagagggcaatggggacggcagcggaggaagtg
aggctggagccggacaaaggaaaggaggctcagtctaaagagttcagctcctcgctcccc
acccgtcagcgaggcagcgagacatggagccgccagctagagttcacgttggtctgtgtt
ggatatgccgtgggactgggaaacgtctggaggttcccgtacctgtgctacaagagtggc
ggaggtgctttcctcatcccgtatctggtcatgttgttgctgtgtgggattccgctgctt
ctcatggaattcactgttggccagtttacgcatttgggtcctgtccacgccttggcgaaa
ttctgccctctcctgaaaggtgtcggcgcagcaacggttgtgatttcattcttgctctgt
acttattacaatgttattatcacctgggctctatactacctgttcaactcatttggatca
tcacttccttggcaaagctgtaataacacatggaacattgtggagaattgcactaatgga
tttcctgggaatgccactcaccttcgatctgccagtcaacaattttttgattacaggttg
ttgcagatgagtagagggattgaagagattggcagcattcgctgggaattgtttggtcta
ctcctattagcttggatcattgtatatttctgtatattcaaaggagttaaatcaaccgga
aaggtggtgtattttacagccatttttccatacctcatcttgataatacttctgatcaat
aatgtgcaactaccaggtgccaaggctggaatcctcttcttcctcacacccatatggaac
aagctactggaagtccaggtatgggtgaatgctgctgcacagatttttaactccattgga
atcggctttggcaccatgatatctatggccagttacaacaaattcaataacaacgtactc
aaagatacactcattgttgcagtaacaaactcagctacaagtatttttgcaggatttgta
gttttctctgcaattggatacatgagccaccagtataacctgcctgttgaagacatcgcc
actgatggcccaggactggtgtacgttgtttacccagaagcgtttgtcaccatgcccctt
gcaccgatgtgggcttcattgttcttcttcatgcttctctgcttaggtgtggatagccag
tttgctatggtggaggtgatggtaaccagtttgatggatgcctggggaaagaacctgctt
tatttcttcaagcgcaaagagattgtggttcttctcatttgttttatcgctttcatactt
ggaattccaaacatcacccagggtggaatttatgtattccaactgatggatcattacaca
gctgtcgtctctctcatgttcctggctttctttgaagttgtggccatttgctggttttat
ggcgtccgtagattatctgccaattacaaggaaatgctgggagccccgccaaatctcttt
ttcaagctgtgctggtgggttgcttctccactgcttgtcacagttatccttgtgtccagc
ataattcgctacagccctgcccgatatggtaaagcgtacacctatcctccatgggcagag
ggtatcggctggattgtctctgtctgttcaatcatctggatcccaattggagctgcacac
acattgtatactagcaaaggctcatttattcagcgccttcattcttcagtatctccagtt
gctgatgtaattccaaccgaaaactgggaacaaatggtcaaattaacatccggtatatac
agcccttcatgttctgccatgcatgacagcaatgacctcactgaagaaactggcatataa
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