Rhincodon typus (whale shark): 109916422
Help
Entry
109916422 CDS
T06055
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109916422
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
109916422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_6
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2HE
Zn_SUZ12
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
109916422
NCBI-ProteinID:
XP_048462685
LinkDB
All DBs
Position
2:complement(31169944..31345189)
Genome browser
AA seq
949 aa
AA seq
DB search
MKRESERIMADGPRCKRRKQANPRRKNVTNYNNVVEASSDTDDEDKLHIVEDESVTDPGD
GDTNALEDDLPTKRSVLSRKEETDEENESTNWIDDDDGRKENADNLGPEAQTRSDGYTGC
DSEGENCFHDSTAGDEQNNEHDPNVQEYLQQGDTAVIFPEAPEEQHRRGTPEACGQEENG
TPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEDNFSCSICSYTFAYRTQLDRHMAS
HKSGRDQRHVVTQTGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHS
GSYSSHISSKKCIGLISLNGRARSGIKTPLGTSPSLSPSTNSPARTQLRHKLENNKPLQE
QPTVNQIKTEPVDYEYKTMVVTSGINCASSFQNGGLSGNNPLQVTTSPQSVVQAVVLPTV
GLVSPISINLSDIQNVLKVAVLENNHVTLPSKDPGTVSSASVQQNSHSLISSISLPLIDQ
DGTTKIIINYSLEPSQLQAVPQNLKKEIPNLADNCTNEKPPEDLTVKTEKMETSVEGVGN
TCLLCNECPGGLNALHELKHYQLKTESHSGENNKISGASVSTEENTSSDQEPLKNLLSLL
KAYYALNAEPTSEELAKISVAVNLPLEKVKKWFEKMQTGQIPVQPSCPSSPTPSNKEVKP
NLLVSHTDSSPACDLQGNSANSEALDKITESQTTSTPLNVMADPSRSNTPSPSPLNLSSA
SSRNSQSYLNTPDSNQEDLQLEPLDLSLPRQQKEGLERPTITSVYHSSVHYVQEEPLNLS
CLKKEQIENDDNPEVNSSAKPINIAIPTNTTQLPTIVAISSQNNVPCLRALATIKQASFI
PQVAYTYKTTNSNGSESQQKPIQTNGNHAEKQDLSSGDVPNTDDQNDSDSMPPRKKIKKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRNNHVFLYIVLSVFSLKHN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagagagcgagcggatcatggcggatggccccaggtgtaagcgcagaaaacag
gcaaacccgaggaggaaaaacgtcaccaactataataatgtagttgaagcaagttcagat
acagatgatgaagataaactgcatattgtggaagatgagagtgtgactgatcctggagat
ggtgatacaaatgcactggaggatgacttgccaacaaagcgttcagtattatcaagaaaa
gaggagacagatgaagaaaatgagagcaccaattggattgatgatgatgatggaaggaaa
gaaaatgcagacaacctggggcctgaagctcagacacgcagtgatggttacacaggctgt
gattccgaaggagagaactgctttcatgattcaactgcaggagatgagcagaacaatgag
catgatccaaatgttcaagaataccttcagcaaggagatactgctgtcattttccctgaa
gcaccagaagagcagcatagacgaggcacaccagaagcttgtggacaagaagaaaatgga
acaccagatgcttttgctcagctacttacctgcccatattgcgatagaggctacaagcgc
ttgacttctctcaaagagcacattaaatatcggcatgaaaaaaatgaagacaacttcagc
tgctccatttgcagctacacttttgcttacaggacacaactggatcgtcacatggcttca
cataagtcagggcgagatcagcgccatgttgtaacacagacaggtgggaaccggaaattc
aagtgcactgaatgtggaaaggcatttaaatacaagcatcatctaaaggagcacttacgc
atccacagtggagaaaagccatatgaatgccctaactgcaagaaacggttttcccactct
ggctcttacagttcacacatcagtagtaagaagtgcattggtcttatatcacttaatggt
agagcacgttcaggaatcaagacacctctaggcacttctccatccctttcaccatcaact
aatagccctgctagaacacaactccgtcataagctagaaaacaataagcctttacaagaa
cagcctaccgtaaaccaaatcaaaactgagcctgtggattatgagtacaaaactatggtt
gtgacctctggtatcaactgtgcaagctctttccaaaatggagggttaagtggcaataat
cctctccaggtcacaacttcacctcagagtgtggttcaggctgttgtattgccaactgta
ggccttgtctctcctattagcataaatttaagtgacattcagaatgttcttaaagttgca
gtattggaaaataatcatgtcactctcccttccaaagacccaggaacagtctcttctgca
tcagttcaacaaaacagtcattcccttatttcatcaatcagtcttcccttgattgatcaa
gatggaacaaccaaaatcatcatcaactacagcttagagccaagtcaactccaagctgtg
cctcaaaatttgaaaaaggagattcctaacctagcagacaattgtacaaatgaaaagccg
ccagaagacctcacagtcaaaactgagaaaatggagaccagtgttgaaggagttggtaat
acatgtctgctttgtaatgaatgccctggtggactaaatgcacttcatgaactaaagcac
tatcaacttaaaactgaatctcattcaggagaaaataataagatctctggagcttctgta
tcaacagaagagaacacctcttcagatcaagagccattgaagaatctgttgtcacttctt
aaggcatattatgcattgaatgcagaaccaacatcagaagaattagcaaaaatttcggtt
gctgtaaacctaccattagaaaaagtaaaaaagtggtttgagaaaatgcaaacaggtcag
attccagtccagccatcttgtccttcctctcccacaccaagcaacaaggaggtcaaacca
aatcttcttgtcagtcatacagattcttcacctgcttgtgatttacaaggcaacagtgca
aattcagaagctctcgataagatcactgaatctcaaactacaagtacaccacttaatgtg
atggcagatccttcaaggagtaatactccctccccatcacctctaaatctctcttctgca
tcttcaagaaattcacaaagctatcttaacacacccgatagcaaccaagaggatttacag
ttggaacctcttgatctgtcacttccaaggcagcaaaaagagggacttgaaagacccaca
attaccagtgtttaccacagcagtgttcattatgttcaagaggagcccttaaacctatct
tgtttaaaaaaagaacaaatagaaaatgatgataatcctgaagtaaactcaagtgccaaa
cctataaatattgcaatccctacaaatacaactcaattacccacaattgttgccatttca
agccaaaacaatgttccatgtctcagagccttagctacaataaagcaggccagcttcatt
ccacaggtggcctacacatataaaacaacaaattcaaatggatctgaatcacaacagaaa
ccaattcaaaccaatggaaatcatgcagaaaaacaagatttgagttccggagatgtgccc
aatactgatgatcagaatgattcagactctatgcctcctcgtaagaaaattaaaaagaca
gagaatggaatgtatgcctgtgatttgtgtgataaaatatttcagaaaagcagttcactt
cttagacacaagtatgagcacacaggtaagagaaataaccatgtatttttatacattgtc
ttgtctgttttcagtttgaaacacaattga
DBGET
integrated database retrieval system
