Rhincodon typus (whale shark): 109916459
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Entry
109916459 CDS
T06055
Symbol
scarf2
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109916459 (scarf2)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
109916459 (scarf2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_C8A_B_C6
EGF_2
EGF_Teneurin
DUF3959
Comm
7TM_GPCR_Srz
ETRAMP
Motif
Other DBs
NCBI-GeneID:
109916459
NCBI-ProteinID:
XP_020371764
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All DBs
Position
24:28636910..28703138
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AA seq
962 aa
AA seq
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MVSRALCAMDPTLSCCFWAAVLAMAALSRGQELSPSGRNVCKTQGSPEVACCPGWKQQDS
DCPIALCQGNFTCKVNEICVRPNECRCRHGYFGANCETKCPERFWGPDCKEMCLCHPNGR
CADVTGKCTCNPNRWGPTCNKLCLCHYGKCDQDTGKCKCEPRRWGATCSNLCYCSANSKC
DPKTGKCICQPGWWGRSCHNQCSCNNSPCDQLMGRCQCKEKFWGPRCEPCLCVHGKCNPT
DGSCSCYSGYRGRYCRETCPAGYFGIGCKRRCGRCKNLQPCMIADGRCLACEPGWNGTRC
DKICAAGFYGEGCGEQCPQCKDGHACNHINGKCLHCNPGWIGTRCDVKCQNGTYGENCNS
VCTDCINGLCHFATGECICNKGFHGPFCNMTCPSGHYGANCAHPCPCIEADCDPVHGTCI
LGSNGRVGVIAAGALVLFLLILLLLFLCCYCLCHKKNRENDSNQAIAVRGKQARRRLRGT
FSQISTKLPRIPIKRQKFPKVVVAHHDMENTLNCSFIEPPSMMDQPSPSWSSHGSFSSFD
TADDGPVYCVPHEESVLENSVREKVNLAEKIVPPISEEDAGEYTCLKGDPNDTLLLKLSD
SEASSNGSGSTSGAVYAKVARLSKQSKDSDVSVNTNSSKNTNTSGKHLSPERTKPPPPDP
STKPKLSWIHGKFNTSSATRSPLMDKTANQLEGHHGTNSSRRRNLSESNAGIYGRQDEKR
STSEVKMRHKDRGLNRAREQVPNDMVCGSRVQKNRASPEQIQNLNGAVQNALKRIGTLPD
DKRAAEGKESLRSPPHAKGRPEVIHPHLPSETANVLAQLKEKTQNKSELNMRQNGLISPQ
QQREKPTPPQKAKRSFGANNQKLNKAIIPTSTNLQKMINPSPEHQETTAGNDRCSTLEDK
QSCNYQERDGVNCTQTKQETGDQTPKRTPIKKPPRKRSKEATLDSQPKTAVMPSQVLAVK
ES
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccgggctctctgcgcgatggacccgactctaagctgctgcttctgggctgcc
gtgctggctatggcggctctgagccggggtcaggagctcagtcctagcggcaggaatgtg
tgcaagactcagggttcccctgaagttgcgtgttgtcctgggtggaaacagcaagacagt
gactgtccaatagctctctgtcagggaaacttcacctgcaaagtgaatgagatctgcgtc
agaccgaacgagtgccgttgtaggcatggatacttcggagccaattgtgagaccaagtgt
cccgaaaggttctggggcccggactgcaaagagatgtgcctgtgccatccgaacgggcgc
tgtgccgatgtcactggcaagtgtacctgtaacccgaaccgctgggggccaacctgcaac
aaactttgcctgtgccactatgggaaatgtgaccaggatactgggaagtgcaaatgcgag
ccacgccggtggggtgccacctgctcaaacctctgctactgcagcgccaactcaaagtgt
gaccctaaaacaggcaaatgcatctgccagccgggctggtgggggcgcagctgccacaat
cagtgctcttgtaacaattcgccatgtgaccagctgatgggcaggtgccagtgtaaggag
aagttctggggaccgagatgcgagccctgcctgtgtgtacatgggaaatgtaatcctact
gatggatcatgctcatgttattctggatacagaggaaggtactgcagggagacctgtccg
gctggatattttggtatcggatgtaaaaggaggtgtggccggtgtaagaatcttcagccc
tgtatgattgccgatggtcgatgtttagcctgtgaacctggttggaacggaaccaggtgt
gataagatctgtgctgctggtttctatggggaaggatgtggagagcaatgtccccagtgc
aaagatggacatgcttgtaaccatatcaatgggaaatgcctgcactgtaatcctggttgg
attggaactcggtgtgacgtaaaatgccaaaatggtacctatggtgagaactgtaactct
gtctgcacagattgtattaatggactatgccattttgccactggagaatgcatctgcaac
aaaggctttcatggccctttctgcaacatgacctgcccctcgggacactatggagctaac
tgtgcccacccctgcccctgtattgaggcggactgtgaccctgtccatggtacatgcatt
ctgggttccaatgggagagtaggtgtcatcgcagctggggctctggttttgttccttctg
atcctgcttctgctatttttgtgttgttactgtctttgtcacaagaagaatcgggagaat
gattccaatcaggccatcgctgtcagaggaaagcaggcacggagacgtttgaggggcacc
ttcagccagattagcactaaactacctagaatccccattaagcgccaaaaattcccaaag
gttgttgtggctcatcatgacatggaaaacaccttaaactgcagcttcatcgagccacca
tctatgatggatcagccatctccatcttggtcttcacatggctctttttcctcttttgat
acagcagatgatggtcctgtgtactgtgtccctcatgaagaaagtgttctggagaacagt
gtccgggagaaggtgaacttggcagaaaagatagttcctccaatcagtgaggaggatgct
ggggagtacacatgcctgaaaggtgaccccaatgatacgctcttgcttaagttatcagac
agcgaagcctcgagcaatggctcaggatccaccagtggggccgtgtacgcaaaagtagca
cgactctccaagcagtccaaggatagtgatgtcagtgtaaataccaacagcagcaaaaac
acaaacactagtggcaagcacctgtctcctgagaggactaagcctcccccacctgaccct
tcaaccaagcccaaattatcttggattcatggcaagttcaacacctcgtcagcaacaaga
tcaccgttgatggataaaacagccaaccaattagagggccaccatgggacaaacagtagc
agaaggaggaatctgagtgaatcaaatgctggcatttatggcaggcaagatgagaagaga
agcacctcagaggtaaaaatgagacacaaagacagaggtctgaaccgggcaagggaacaa
gttcccaatgatatggtttgtggaagtagagtgcagaaaaatagagcgagtcctgaacag
atccaaaatctcaatggtgctgtccaaaatgctctgaaaagaattggaactttgccggat
gataagagggcagcagaagggaaggaatcgctacgcagtccaccacacgcgaaaggtaga
ccagaggtcattcacccccacctaccctcagagacagctaatgtgttagctcaactcaaa
gaaaagactcaaaataagtcggagcttaacatgaggcaaaatgggctgatttcacctcag
cagcagagggaaaagcctactccaccgcagaaagcaaagcgctcatttggtgcaaataac
cagaagctaaataaagccatcattccaacgtcaaccaatcttcagaaaatgatcaatcct
tctccagagcaccaggaaacaacagcaggcaatgacaggtgctcaaccctggaggataag
caaagctgcaactaccaggagcgagatggagtgaactgtactcagaccaaacaggaaaca
ggtgaccagacacctaaaaggacaccgataaaaaaaccacccaggaagcgcagcaaggaa
gcaacgttggactcacagcccaaaacggctgtgatgccatctcaggtgctggctgttaaa
gagtcataa
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