Rhincodon typus (whale shark): 109916477
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Entry
109916477 CDS
T06055
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109916477 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109916477 (xrcc4)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109916477 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
Ferritin_2
XLF
Mur_ligase_M
Motif
Other DBs
NCBI-GeneID:
109916477
NCBI-ProteinID:
XP_048448170
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All DBs
Position
3:complement(90947556..91325020)
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AA seq
341 aa
AA seq
DB search
MERHVCRIWPLSSPDTVYYMQINWEKDLGSGFTVTLCNGEQAWSGRVSENQVTMEAKEAE
MDREKYVDELRQALTMGEERVKTYSFDFFKDNDKDVFHFLYEKLMQDISFKLGSVELRKV
SDSTEVIKGLIDYVLHCNRELQDKNEHLQQENERLLCDRNYSLKELEKYVKAKEELEQDL
YSRFTLVLNEKKAKIRSLQENLKCIDEQVKFNSQSRSVAANSQEVSVPEENFDCSTIEEN
KGHISENRIWSQPSRSTNAPAQSDPICNTLHDVVDVAPSRKRRHRLPQQKNKVEETSQDS
QEKRPCPMSSASSVIHHQDEEEESQKTIPNTVEADDLFDNI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcatgtttgcagaatctggccactctcctcaccagacactgtatactatatg
cagataaattgggagaaggacctgggaagtggttttacagtgactctctgcaatggagaa
caagcttggagtggaagagtgtcagaaaatcaagtaacaatggaagcaaaagaggctgaa
atggacagagaaaaatatgttgatgaacttcgacaagcactgacaatgggtgaagaaagg
gtgaaaacctacagctttgacttttttaaggataatgacaaggacgttttccatttttta
tatgaaaaacttatgcaagacatctcatttaaacttggctctgtggaattgcgaaaagtc
tcagactcaacagaagtcattaaaggactcatcgattatgtattgcattgcaacagagaa
ctccaagacaaaaatgaacacttgcagcaagaaaatgagagactgttgtgcgatcgtaat
tacagcttgaaagaattggagaaatatgtaaaggctaaagaagagctagagcaagacctc
tattcacgtttcaccctggtgctaaatgagaaaaaggccaaaattcgaagtttacaggaa
aatttaaagtgcattgatgagcaagtgaaattcaacagtcagagcaggagtgttgctgct
aatagccaagaagtgtcagtacctgaggaaaattttgattgtagcactattgaagagaac
aaaggccatatttctgaaaatagaatctggtctcaaccttccaggtcaactaatgcccca
gcgcaaagcgatcctatatgcaacaccctacatgatgtagttgacgtagcaccaagtcga
aaacgaaggcatcgacttccacagcagaagaataaagtggaagaaacctcacaagattct
caagaaaagagaccgtgcccaatgagctctgcctcatctgtaatccatcatcaagatgaa
gaggaagaatcacaaaaaaccataccaaacactgttgaagcggatgatctctttgacaat
atttaa
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