Rhincodon typus (whale shark): 109916568
Help
Entry
109916568 CDS
T06055
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109916568 (fubp1)
03041 Spliceosome [BR:
rtp03041
]
109916568 (fubp1)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109916568 (fubp1)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109916568 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KhpA-B_KH
DUF1897
Motif
Other DBs
NCBI-GeneID:
109916568
NCBI-ProteinID:
XP_048458371
LinkDB
All DBs
Position
10:complement(71525473..71568885)
Genome browser
AA seq
739 aa
AA seq
DB search
MAEYSAVAPPSALTGGASSGGGGAGGAGSGAGAGAGGGGGGGGGGGAAAGGGGGGGPGAG
GAGGFKNDAFADALQRARQIAAKIGGDTGTTINTSDYGYGGQKRPLEDGDQPDTKKVAQN
DPFGAQLAAMHQQRAIATEEYKVPDGMVGFIIGRGGEQISRIQQESGCKVQIAPDSGGLP
ERSCMLTGSPDSILAAKRLLDQIVERGRIGPGTHHGDGPGTSVQEIMIPASKAGLVIGKG
GETIKQLQERAGVKMVMIQDGPQPTGSDKPLRITGDPFKVQQAKDMVMDLIRDREQGGFR
EQRNEYGSRLGGTNEALDVPVPRFAVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGTTPER
IAQILGPPDRCQHAAEILTDLLRSVEAGVPPGPGGPGPGRGRGRGQGNWNMGPPGGLQEF
TFTVPSSKTGIIIGKGGETVKAISQQSGARIELQRNPPPNADPNFKMFIIRGSTQQIDYA
RQLIEEKIGAPTGPPGPPGPHGPHGPHLPPGPHGPPGPPGPGTPMGPYNPGPYNPGPPGP
PQHGPPAPYAPQGWGNAYQPWQQQGQPDPSKAGDANTAAWAAYYAQYYQQQAQQPPAPSS
TGQGSTPNSAPGKSSAADPNQPNPAQPPQTDYTKAWEEYYKKLGQQGQPQGAQQDYTKAW
EEYYKKQSQAAQASSTAAQPGGQPDYSAAWAEYYRQQAAYYSQTNSQGIPQHPPAQQPPQ
IIDLSTSDSVTLQTKSRPN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatattcagcagtggcgccgcccagcgcgttaaccggtggtgctagcagtggt
ggcggcggagcgggaggagcaggcagcggtgctggcgctggagctggcggcggcggtggt
ggcggcgggggaggaggagcagcagcaggtggtggcggcggcggcgggccgggggctgga
ggtgccggcggcttcaagaacgacgctttcgccgacgcccttcagcgggcgaggcagata
gcagcaaaaattggtggggatacaggaacaacaataaatacatcagactatggatatggc
ggacagaaaaggccgctggaagatggagatcaaccagacaccaagaaagttgctcagaac
gatccatttggagcacagctagctgcaatgcatcaacagagggcaattgccacagaggaa
tacaaagtacccgatggtatggttggattcataattggtcgaggtggggaacagatctca
cgcatacaacaagagtctgggtgcaaagtacagatcgctcctgacagtggtggtttacca
gaaagatcttgcatgttgacaggaagcccggattccattctggctgcaaagaggttactt
gatcaaatagttgaaagaggtcgaattggtccaggtacacatcatggagatggaccaggt
acttcagtgcaggagattatgattcctgcaagcaaagctggacttgttattgggaaaggt
ggagaaacaatcaagcaactgcaagagcgtgcaggagtcaagatggtgatgattcaagat
ggacctcagccaacaggatcagacaaaccccttcgcatcactggagatccattcaaagta
cagcaagccaaggacatggtgatggatctaattcgtgaccgagagcaaggtggttttaga
gagcagcgtaatgaatacggatcccgtttgggaggaacaaatgaagcattagatgtccct
gtacctcgctttgctgttggtattgtaatagggagaagcggagaaatgattaagaagata
cagaacgatgccggtgtgaggattcagttcaagccagatgacgggacgacgccagaaagg
atagctcagatcttgggccctccagacagatgtcaacacgctgcagaaatacttacagac
ctcctacgaagtgtggaggctggtgtgcctccaggtcctggtggtcctggccctggcaga
ggaagagggagaggccaagggaattggaacatgggtcctcctggtggacttcaagagttc
actttcacggtaccgagcagcaagactgggataataattggcaaaggtggtgagactgta
aaggcaatcagccaacagtcaggagcacggatagagcttcagagaaatccacctccaaat
gctgatcccaatttcaaaatgtttattattcgtggatcaactcagcagattgactatgct
cgacaacttattgaagagaagattggggctcctactggtcctcctgggccacctggtccc
cacggtcctcatggacctcatttgcctcctggccctcatgggccccctggtcctccaggc
cctggaactcctatggggccctataatccggggccctataatccagggccacctggtcct
cctcaacatggtccaccagctccatatgctccacaaggatgggggaatgcctatcagccc
tggcagcaacagggtcaaccagatccaagtaaagctggagatgcaaatacagctgcatgg
gcagcatattacgctcagtattatcagcaacaagcacagcagccacctgcaccttcaagc
accggtcagggcagtaccccaaattctgcaccgggtaaatcatcggcagctgatccaaac
caacccaacccggcccagcctcctcagactgattataccaaagcctgggaagaatattac
aagaaattaggtcaacagggacaaccacaaggagcgcaacaggattatacaaaagcttgg
gaggaatactacaagaaacaaagtcaggcagctcaagcatccagtacggcagctcagcca
ggtggacagccagactacagtgctgcgtgggctgagtattacagacagcaagcggcttat
tacagtcagacgaactcccaaggaattccccagcatccgccagcgcaacaacccccacag
attatagacctaagcacttctgacagtgtgaccttgcagacaaaatccaggccaaattga
DBGET
integrated database retrieval system
