Rhincodon typus (whale shark): 109916599
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Entry
109916599 CDS
T06055
Symbol
chmp1a
Name
(RefSeq) charged multivesicular body protein 1a isoform X1
KO
K12197
charged multivesicular body protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03272
Virion - Hepatitis viruses
rtp04144
Endocytosis
rtp04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109916599 (chmp1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109916599 (chmp1a)
09143 Cell growth and death
04217 Necroptosis
109916599 (chmp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109916599 (chmp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109916599 (chmp1a)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
109916599 (chmp1a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109916599 (chmp1a)
Exosomal proteins of other body fluids (saliva and urine)
109916599 (chmp1a)
Exosomal proteins of colorectal cancer cells
109916599 (chmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Ist1
DUF8784
Fv1_N
Sde182_NH-like
Motif
Other DBs
NCBI-GeneID:
109916599
NCBI-ProteinID:
XP_020371917
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All DBs
Position
15:complement(20818043..20830094)
Genome browser
AA seq
198 aa
AA seq
DB search
MDDTLFQLRFTSKQLERLAKKAEKDSKAEHTKVKKALQQKNIEGAKIYAENAIRKKNEGL
NWLRTASRVDAVASKVQTAVTMKGVTKNMARVTQGLDKALKSMDLQKISAVMDKFEQQVQ
NLDVHTSVMEDSMSSAMTLTTPQEQVDSLIMQIAEENGLEVMDQLNQLPEGAASLGESSV
REQDKEDQLSKRLAALRN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggatgatactttgtttcagttacggtttacatcaaaacagctggagagattggctaag
aaggcagaaaaggattccaaagctgagcacactaaagtgaagaaggctcttcaacaaaaa
aacattgaaggagcaaagatctatgccgaaaatgcaatcagaaagaaaaatgaaggactg
aactggttgcgaacagcttcccgggtagatgctgtagcatcgaaggtgcagacagcagtt
acgatgaaaggggttacaaagaatatggcacgtgtaacacaaggattggataaggcactg
aaatccatggatttgcaaaagatttctgctgtaatggacaaatttgagcaacaggttcag
aaccttgatgtccacacttcagtgatggaggactcgatgagttctgcaatgacactgacc
actcctcaagaacaggttgatagtctcattatgcagattgcagaggagaatggtctggag
gtcatggaccaactaaaccaacttccagaaggtgcagcatcccttggtgaatcctctgta
cgtgaacaggataaggaagaccagctttcaaaaaggttggctgctttgaggaattga
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