Rhincodon typus (whale shark): 109916673
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Entry
109916673 CDS
T06055
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109916673
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR
BNR_6
Motif
Other DBs
NCBI-GeneID:
109916673
NCBI-ProteinID:
XP_020372000
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Position
18:complement(11040064..11138688)
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AA seq
818 aa
AA seq
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MAAGLSACLLVALLFGCPVSCDHKRDFPELPAHRLEVFQQLATLRGAFRYKRGAPHSRSA
QQGGMSSCGTGASDQAKLNKNTHKWTFEDDDGSTVTLAWVGDGTGIILALTTFNLPVAWL
FFGGSSRLYRSVDYGKTFTDVSNLVNNYYIRKEFGINVGPEHSKKVILTAEPKYFRHTGN
KGGVIIRSSDSGETFHAVRLPFHPNQPMHYHSSNSDLLLAHSTDHTLFLSQDFGINWSTI
HKFVYAFSWGPGNTIFFTTHPDGIYDKNERGVLELKKTTDFGKTSRTLLTKVYSFGFAGR
FLFVSVINNRTLPRSVYVSADQGESWNKAQLPPVSHEQFYSILAADSEMIFMHVDEPGNT
GFGTIYTSDDRGILFSKSLERHLFSDTSSTSDFTNVTSLRGVYITNVLDEDNNIRSMITF
DSGGEWKPLKKPDNSHCNTTKDSQMCNLHIHAAYSISQNLKVPLAPISAANAVGLILAHG
SVGDAISTMIPDVYVSDDGGYTWSKALTGPHFYAILDSGGLIVAVESNPDKAIDNVKYST
DEGQCWKNYIFTNESFIFVGLVSEPGTKSMNISLWGYRQESTYSTTWLSITIDFEELLTR
DCQEKDYIKWLAHSTDAGEKNDGCILGYKETYQRLAKASVCRNGRDYIVSKDQSLCPCMK
DDYMCDFGYYREGDSDECIEQPDLADHVLEFCLQGKEELLKTQGYRKVPGDKCEGGFLPN
RSEQMTNMKCEMVLSLKDPLPKITVVIIVISALAASVLMMTSIVLIFKKYVCGGRTLVYR
YSVLQTNTDDACIADNLDSSRTNTERVYHDDSDVDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggggctcagcgcctgcctcctcgtcgcgctgctctttggttgcccggtgtct
tgcgaccacaagagagacttccccgagctacctgcccaccgactcgaggtcttccagcag
ctggcgacccttaggggcgccttccggtacaagcgaggagctccccacagtcgcagtgcc
cagcagggagggatgtcctcctgtggcactggggcctcagaccaggccaaattaaacaaa
aacacccacaagtggacatttgaagatgatgatggttctactgtaacattggcttgggtt
ggagatggaactgggatcattcttgctttgactactttcaacttgccagttgcttggttg
ttttttggtggatcctcacgactgtacagaagcgtggattatgggaaaacgtttactgat
gtttcaaatcttgtcaacaactattatatacgaaaggaatttggaattaatgtaggacca
gagcattccaagaaggtaattctgactgctgaaccaaaatacttcagacatactggaaat
aaaggtggtgtaataattcgatcgtctgattctggtgaaacatttcatgctgtccgacta
cccttccacccgaaccagccaatgcactatcattcctccaactcagatcttctgctggcc
cacagtactgatcatacactgtttctttctcaggactttggtataaattggtcaacgatc
cataaatttgtctatgcattctcatggggacctggaaacaccatattcttcacaacacat
cctgatggcatttatgataaaaatgaaagaggggtactggaactgaagaagacaacagat
tttggaaaaacatctagaacgcttctcaccaaggtttactcattcggttttgctggccgt
ttcctctttgtctctgttatcaataaccggacactgcccagatctgtttatgtatctgct
gatcagggtgaatcttggaataaagctcagttgcctcctgttagccatgaacagttttac
tctatacttgcagcagacagtgaaatgatcttcatgcatgtggatgaacctggcaatact
gggtttggtacaatctacacttctgatgaccgaggaattctattctccaagtctctagag
cgtcacttgttttctgacacaagcagtacatctgattttacaaatgtaacgtcactacgt
ggagtctacatcacaaatgtgctggatgaagataacaatattcgatcaatgattacattt
gacagtggaggcgagtggaagcctttgaaaaagccggacaatagtcactgcaacacaacc
aaggattcacagatgtgtaaccttcacatccatgctgcatacagcatctcccagaacctg
aaggtccctttagctccaatcagtgcagcgaatgcagttggattgatcttagcccatggt
agtgtaggagatgccatttctactatgatcccagatgtttatgtgtctgatgatggaggg
tatacatggtcaaaagcattgactggcccacacttttacgccattctcgactcaggcggc
ctaattgtagcagtggaatccaatcctgacaaggccattgacaacgtgaagtactcaact
gatgaaggacaatgctggaaaaattatattttcacaaatgaatcatttatatttgtggga
cttgtatcagagccaggaaccaagtcaatgaatattagtctctggggatacagacaagaa
agtacttattcaacaacttggctgtcaataaccattgattttgaggagctcctaacaaga
gactgccaagaaaaggattatatcaagtggttagctcattccacagacgctggtgagaaa
aatgatggctgcattttgggatataaagaaacataccagaggcttgcaaaggcgtctgtt
tgcagaaatggaagggactacattgtgagcaaagatcaaagtttatgcccgtgcatgaag
gatgactacatgtgtgattttggatactaccgtgaaggagatagtgatgaatgcatagag
cagcccgacttggctgatcatgtgttggaattctgcttacagggaaaagaagagctgctg
aaaacgcaagggtatcgaaaagttcctggtgataaatgtgaaggtggtttcttgcccaat
cgatcagaacaaatgacaaacatgaaatgtgaaatggttttgtcactgaaagatccttta
cccaagattactgttgtcatcattgtaataagtgcgttggcagcatcagtgctgatgatg
actagcattgttcttatttttaagaaatatgtgtgtggaggaaggaccttggtctatcgt
tattcagtcctgcaaaccaatactgatgacgcctgcattgctgataatctagacagcagc
agaacaaatactgaaagagtttatcacgatgattctgatgttgatcttctggagtaa
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